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Mouse element [ mm1734 ]


Position: chr4:138,018,742-138,020,284 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Camk2n1 - Vwa5b1

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGGTCCATCAGGGTCAAAGaattccctccttttcttgtgtgcacactgcgtcttcgggg
gaggggggcaatctctgtgcaaagcgcatattttaggggcaagagcacttccacgtcttg
agatcttctgcacaggccgtcaaggaagccattgtccagtagttccatgtccagcaaaga
gagacaggcacaagttcagagaagccatgaattccaggcacaccacagggctggagaaga
cccaggatttgcaaaatcccccacagtgtagtcagatgaccgatagatggagccgtgcaa
aaaagagaaagagagagagggaaaaaaaagatttttaacaaattaatagaagcgacttcc
tgcggaggaactgtcatcctggttagaaactgtgcagcctctaatctttttcttggaaac
tcaggcagctgctctggtttacacaatctgcctatgggagggaaagggaacagggaatca
accgtgctgtccttattcaacagcagagaagtctcctaaaccatatgcaaaaataaatct
caggcagtgcctgtaacccaggaaacctggcagctggactgaagcctgctgggcggcctg
gggacaaagatcttaggtccaaagacccaagccccactgcagagggaccaagagtcacag
acagacagacagacagacagacagacagacagacagacagacagacggacagacatcccc
agccttcccctcaagtgttcccgatacacagatttgcctgaccttggcacccctcatgct
ggagggtctgtccctaactcggggcctggggggacacccccagagtctggaacagggtcc
ttgacctagaggcagctgttttgaggacaaagggtcaccaagaggggaggaagtcacagg
gaggacaggctgtattggggaggacccggaagtatgccctgggaaatcctaagagaatag
ctgatgggaggggtgggcagtcgatgaggggggagaaagcagaccgcgacaacccggata
cagctagggaaagaaatgccctgtgggacgcagctgggtggccaagggtttcaggagttt
accctgggagggtgttttatgaaggagatgaactcagtgaattcattaattaagtccata
ttcattcaacaattttttttttctggcaggcagagagggggcggggcttgtgcttggcac
tggggagacagtgcttgctagagggaggccctttccggtccagaaaccacagtgtctggt
ctgtgacctttcaatgactgaatttcaagagggtgggggtgggcccaggggaagtgcagg
caacctctaggggagtcccagggagatcgctgccagcgcccagcttttgagtttcacaaa
gagatcatgatttccttcctttcggccagggctggctgtgtgaccaccatccctagcaag
tatattttgtctctctgggactcgtttctctatgtaaaaaataaaataaaataaaatctt
tcccctcatttctagttgtagacCAGTGGTTGCTCTGTCCTGT
Primer
(+)ggggtccatcagggtcaaag
(+)acaggacagagcaaccactg


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.