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Human element [ hs1730 ]


Position: chr2:223,150,742-223,151,920 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PAX3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CgtCTCCCAGGTTTGAGCAATTCtcctgcctcagtcccccaagtagctggggttacaggc
gtgtgccatcacacccagctaatttttatatttttagtagagacaaggtttcatcatgtt
ggccaggctggtctcaaactcctaacctcaggtgatccacctccctcggcctcccaaagt
gctgggattacaggcgtgagccaccgcgccaggcggcttgatcagctatttttaaacaga
atatgttggattaggtccaagatgcgtggggaattggcttccagaattcagttgatattc
acatactattacagatacagtaaatatggccaaataaaagtacataagaaagtatagtca
aggaattactgaatgagtttaaggagccaaacacacagccagtttaatagttgcctatct
tgagttctaatctgttttgctagggaaggtaatttatcaatcacctcagtaagaggtgga
cataaaaactcagactacttcaatcaacttactttaccacaaagtggaggtgttttgttt
tgttttgtttcacttaaaaaatcctgcagcaaaatgtaaaatggtgcgaactttgctgta
tgcaacgtgcaaggcaaaatcctttctcaagattttcctttcccctagaagaaatgtgca
tcaaatcaaattcttaacactgttgcccttatttaatacaatttcattttcaaagacaca
tggccacttcaacaacagaaattacctgttggtggtttttaaaaagatttgtcaggaagg
aaagaaggaaaagaagaagataagaatttataacacctattattcctcaacagtcttcaa
taactatatttcatgattttcatatctccctttgacaatggtgaactttctaattcttct
ctcgtgaattgatgttttatgatgttaaacaggcattttgataactgtgcatattccaac
taaaacttggaaatatacatattctcttcattttggagcatgatctcagcttagataatt
tgaagaaagccttcctaaaggagaggtgttctgcttccagtaaaagctcacaatgctatt
ggagctcagtatttcccaacactgtagggtagagctaaaagctgagttgtgtcttgctct
accgaagactggtgtgAATGGGACAAAACTATCTTTCCC
Primer
(+)CACCTCCCAGGTTTGAGCAATTC
(+)GGGAAAGATAGTTTTGTCCCATT


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