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Human element [ hs1728 ]


Position: chr2:135,279,657-135,281,488 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TMEM163(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CcCCATCCTAGATCCGTGGAGAatttctagcgggggtgggcttagactcaggagtcttta
taagctccactgatggctctagagcacccagaagtctaagaacaggacagtcactgtgac
agcctttgtctgcccaggcacaattactgccaggccaactaggggcttgttttccacaag
agggagagactggcactgcccactatctgatttccctcaagaggaaagaaagcagcataa
aacacactggctgaattcatcacagagaaggaatgcgtttgaatttgcttcactttattt
gagagaagccagctgctaagagagcacctaaaaggtgaactaagcaggttagtcccagaa
actaagccatcttggcactgacagcatccgaagtgctagcactttaaggcctgtggattc
atggactggataatttgctcccaaaagtcccacaaccagaaattaggagggcacatttgt
aaataacccacagtgcttgtgttagaggccacagatcccatagtggcttcaccaactgtg
gcattttgcccacaacagaagcagccttgtaaggacaggtagccagccacacagggcgaa
tgactgtgggaacagtaaagagaaaagtcatttattattcctgccatgattactccactg
gcatatctaaggctcatcccaattttccctactgttacaagtaccccatttttctctcat
ttgtctgcccaatgatcttgaattaaagtcacatgctgattttaaacaaggggcgggggg
aaaaagatcgaatcccttgcatgttgaaagaaaaatgccgtgtggctttgagcagacgtt
gtgatgcctattcccctcctaattaccagcctgctggctttctgacagatgggatagaac
cacaccgcctcatacagcacttatataatgaggtgctggtaatcacgactccacattcaa
tctgctccattaatgccagaggtggttcaaccaaattagagaattacggtcttacagata
agactgaaacgtgtgtacacagtaattttattaaccatgaacatgctttgtgtaaaaagg
gcttccagttcaaaacagtgagagagacatgcaatttgcaaccttcactgatttaatagc
ctgggagtgggtctgcaggtgggggtcggagcgtctgtgtgctattactgaactgcgaca
acaccacagaataaaaacatcaccagccagtcaattaagggaattattcatgagcttgtt
aaaaggtcacatgccaaaaacttcatgtaacaggaaagagctgaggtgcggtactcagtt
gttttgttgcttttaaaactcagagatgattggaaatgaggataagccaaatttcattta
gaaaaaatgcttaaaaagctattactgatgtctttcaaaatccattactgagaaaaccta
gaaaagcactcctgtctctcccccaatctcccctcagctgctccctgccaccattacacc
acgtttctcagcaaaggagctgatatctaattcatcttggtaggaattactctgatcgtg
gtgaggcctcttccaggcatttaggatcagtctagaggtagacaagtggtttttctccta
gtcaaagaaataaagtttccattaaacagagaaacgggaagtggggaggggtcctgaaac
ccagccttagtaagtaacactactccagtggttctcacctgaggagatttttacccccac
tccacctcacttctcccccaactccctcccacaggggatacttggcactttctgtagaca
tttttggttgtcAAAACCAAGTGGGTGGAGTG
Primer
(+)CACCATCCTAGATCCGTGGAGA
(+)CACTCCACCCACTTGGTTTT


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