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Mouse element [ mm1718 ]


Position: chr3:79,334,976-79,336,695 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Fnip2(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGCTCCTTATGGCCAACCTcgctattcaagttagtttgtcatacacatccttttcacaa
aaggcattttccagagtcgaaccaggttctccctcagcagctggcttcagcactcccaca
aagcaggtctccagtccttgcctgtcctctggtcctctgtgtgctaagttaaagctcaga
gctttaccttttgccttataaagctcagcgttccaaaagaggacacaatcgattccacac
aagttggccccagcagaggtaatgaacacttaagaagttaagatagtgacagactcctaa
gagccactacagatacctgtgcctacctacatcttttctacagaggaaaggacttgtttc
tacaagtcaccaataactacatttctcctacgtaaagcattcttgaaaacataattcaaa
tcaataaagcttcttagagtcccgtgtggttagtattttccagactgaaacagaactaaa
cattcatacctgtggttgagcactgtggaatttgtgtcgcgtcctcctctggcacatttt
ggaatctttgcacatacaagtgtcttgaaaatcctcccagcaccacaagtggtatcggtc
agacatctggctgactcctgttggcctactggccagtttgtgctgtctgctgtaccacca
cacatctcctgagggcatagatgctcttcagttgatcctgaccagcagtgtggactagcc
cactctgtaaagttccttcattatctgaaggatatgccacggtgacgagcagcagctcca
gactaaagaccatttccctccaagcacagcacgtgagcccagctactactaacttcctct
tttgggagcttaaaaaaagggatgttcattcatcatgcaaatgaagcccaggatgacttc
tagaagcggatgtgctctcagtaaacccataataaagtagacaagtacaaatctctccct
gctttttctccgcctgcactcaagtgcactcaacaggtccagcagcttgcactgactcac
accatctgcatctcgagctgagtttacaagcagccctgccttcactagtcacgagcccag
ctcatgtggctctgggtaaaccttcagctgcaaggttgctctgacattggccgcaccacc
ctcttaatggttctcatgtgagtaagtatcagctgacagcttctactccacaaccttgca
aaactctgtccacagtgagtgaaggatggctacccacaagagtcgaatggagatcttaat
atgtagaaggagacgtgtgggatgagaagcagagctggggcacactctggccatggtatg
agtggggatgggggaaagtaatgatgatgagaggcaactgatggtaaaaagccttctaac
tcttgcatttgaattcctgggcttattcaagctgagaaagccctgaattaccagagccct
agaacagtgctagcttctgacatcaacatagctcacctggatatgggagtgttaggagat
aaatttgagctggtgatcccctaaacacaggtcaaggctagaaaccaacagcagagtgat
gataccaattccttttgcctggaattaggttgaagaaagtactactgggtccatccctaa
ggtgaggtgaaccattggctggctctatggtcttagtcctaaaagtatctttataaatta
cccactaatttaaggtaaggAAAACTAGGGATGCCAGGCC
Primer
(+)gtgctccttatggccaacct
(+)ggcctggcatccctagtttt


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