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Human element [ hs1718 ]


Position: chr8:33,660,674-33,665,591 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: DUSP26 - UNC5D

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tACCTTCTGGAATTCACCATGCactgatagtgcaactatttttttttcacataaatatgt
tttgcttttcagctagatttcaactccccgagattactgcaccatgtaaccaccgcagag
tgtgctgttctttggatggagttaggtgctcattatagacttgttttgataatcatgact
aaacatcacaaatgttttactgaaatctttcactgtgtcagaagtgtgatgggcacatag
gataaaacatgaaaaaacttcctgttttttaggaagtcaagttatagcatcataataata
acaatctagttttacttactagatccatgaggtctggcagagatactaatcttagcaaat
acccattgatttaatcaccattatgtagacctgattttggaagcacagtaccgtattgtc
atctgatcgcctggcatgttcatgtaaggctgggattgaattgtttttgaactgccatga
gtcatgccaatgagctgcatgcactatttctcatttagtgtcttgcccatctaaattcaa
accaactgtcaacacaggctctgtgctgggcactggacaaagagagagcatatgtatttg
acacattactaattctcaagggctcacaactgggacttacatcaacactgcttaccccta
ctaggaggcagactgctaaattcaagaatagagataaaaacgtagcattactggagtgat
taattttgactgcagtgattctggcagacttcacaaataaattgacatttgagttggccc
ttgatattggattttgacaggcagagatggaaggaaagagcaacccaggcaggtgaaaca
gaatgaaaaaaggcacgaaaatgtgaaagtttcttccctaagtaagcagtggaggcagaa
tacttgggcatggtttgaatatagattttctagggctgcgaatgacccaaatcaggggct
gccgtggcattttccaggtcaaattaggccactggccaagatttatttggcctagcacaa
ggttttccatttttctgacttgctgccaacatttaaaaatcaggagttttcacagacaca
tttggattctggctgctcttgaagaaaatctaacaatagagggtctgcatttcctcaagg
cagcaactggctggcactgagtaatggctgttctttttaaacaggcaagagctcttcagc
ttgtgaccatcctaactggcctcaatcaaatgacacaggcaggtgtttgagtttgtgccc
tctgacctaaaagctttactgactcctgcatgctgggagaggtggtgtcgattgcaggga
gctttatgcagtggttgattaaacacacatctggaagactcttgggaattggcagactct
tcaaggaagagaaagtatcaggaagtcatcccagctgctgctctgaggaatcttgcttgt
ctaattagatcttaggctggcacacctggtggatttttcgaggcagggaataatgaccct
cacagtttaaaagatctctttccatggcaacccacaatgctttagtcaatttgagagctt
gttagcatcacgtctctagtttatctttcccttataagtgagttttctttctttctgaat
tgcatactggtggcatgccaacaagaatcaaaatccactttcagaacaaaggaggaaata
tatatgtgttttttctctttaatttcctttgttcagctcttatgccagtccgatattcct
acttcttggacctttgtgagccaaccttttatttccctttttcttatggaaaagtgcact
ttgattgcactggtgcttatgaaccaatgcaggaatttttttttttttttttttttttta
gacagagtcttgctctgttgctcaggctggagtgctggagtgcagtggcttaatctcagc
acattgcagcatctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagc
tgggactacaggcacgtgccaccaccctacccggctactttttgtatttttagtggagat
ggggttttgtcttgttggccaggctggtcttgaactcctgaccctaagtgatccatctgc
ttcggcctcccaaagtgctgggattacaggcatgagccacagtgcctggccaatgcagga
ctttttaatacaaatgcatgtgaaggccctcaaatgcaaacacacagaaacatacgtaac
aaaatgcacttgtttatgtactgtgtacacacagagacctgtgagctcttgctcatatac
aaacttgctctgtgcctgatgcctattaggagtgagaggttcctaactgacataaccttc
ttttcagaagaataaaatagaaggttactgagtctacgagctaatctgtctaattagatg
cctctgagcaaaatgcataaaatttgcatgaattatcttaacatgcaaagaataggatac
tgggaggaaaacccaagaaaatttgcattttgatgggggtgggggaagtttgagggctat
catatagaagatcctttcttttatgttttgggactcagttcaagaggagctgcagtgggc
tgactaacatcagcaaagacagcccgtatatccttgggctctgcaagcagttactccaag
tcttgtctgcagactgtacagtggaacagccatccaaccccaactggggaaacttcatta
aggcagtgcaaagtaatcagtttcagtcctggcctctggctggcttgaaggacaatccct
tctcagctgtaggtggcactgttgtatctattgtaagaagcgctgtacttcggctagcta
catcactgctatttaaaatggaggaaaaagagaaaaaaaataaaatccaactccctcttc
ctccttgtcccactccatctcctaacatgcactgtacaccctacctgggcaaacctcctc
catgccacccagcggacattatatgttgtttaagcttatatgttttgtttaaaatcagtg
gttctcttaggccctttgcagtgtatgtgcaatttagctctgggatgtttcatctgaagc
tcaactgcctgagatgatacttgcttctccccattctcctcccctctaccctccctattt
ttcctttccctgctataactcacattcacatagtgatgggtggtattggaagacagactg
gggaatagtctgtgtcttggactctggaagaggcactggttagtaatagaaataaaaacc
gcaggagctgagtggcagtgtgtgctggggagatggcaacttgaccgaaatgggagcgtg
ggaagagagccaactcttgcttctcccatttcattctttctggcagttcagaaaactggt
ttcccctgggttgacaggcttgggccaaatatgagaattaaattctgacatctagttaga
ggtagtgaggttgaggtggtggaagaagaaccactccttaggagtgcctcagcttcccca
gtgctgagatggaacgttgtactgacccattaggcaaagccttatggacaatattaaaat
gatgtgtatgggaaaaaaaagtgataggtttaggagatgggagctaattctcaaaacatt
gtagtatataatgaaaagacagaaaaaatacaagaaaaataggtaatatttggatagcaa
cttaaactttgcaaagttctcccaccctcaatatgaagcatcttctttcctctctcagca
ttggtatccctgtttcacataggaaggcactgggtccattcagtgacttgctcaaggtca
tggagggagaagtagagccagttcctaaaaccaggttgtctaactccaagttctgccatc
tctaggtatttgtttcattttttattcccaaataaatactgcagttgagaagcaataccc
aagtctaaagaatcaacgtttgattcttgccacccaagaatcaaatcaagatattatgct
taaagcaataaaaagaggtatccagtctttttttatttgtttgtttttaatgaaaattct
gactttacattgacttcagaagcaataaccttagggtatcctctctgttcctttgttaat
tttgctgttttttctttagcttataattttatctctttgagcctcaatggtatcctctgt
aaaacaggttgaataaactgtttctaagctttgggcatctagggaaaacaaattaatgct
ttatatgtcactcagggttctttgaatgaaaaattcaagatgagcattagtttttatcat
tgttttaatagcagtttattaagccaaaaccttagggaatcatgtaagaatatatgattt
cctctgcctgattacatctttatctgtgagttttgtaaaagtttacaatggatgaaatag
tacttaacagcttcataaaccaaactgttatgcacaattaaatggtcttcactcttatta
tcttaactaatgaattttgccaggcatctccgttatagctgtatgatttataaagattat
atttactttttctccttataagaacctaatgagaccaaattggttgcatgtaatcagaca
ctggcctttttcatctcttcgggttttatttacgaaaccttattagagcaaacgtactga
gtaatatgcagcgatagctaggttttgcttaatgatccaaacagccaacatggaatgcag
ataatgaaatgacaggctgattacaaatgcgaggagaaaagtaaatgtgctcagagccca
tttctacaatccttacctaggcagaacacccattaacatgtttcaacctaagaacacata
cttctacagaggcctaagataagactgtaacacatatctcagaaactgagggttgagttg
ttttccagcagtgtaggattgggccgaagtattatgtaCAAGTGGTTTGTGTGGGATG
Primer
(+)caCCTTCTGGAATTCACCATGC
(+)CATCCCACACAAACCACTTG


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