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Mouse element [ mm1714 ]


Position: chr19:40,371,402-40,373,696 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sorbs1(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCCTCTCCCTAGCCTCTATccactttactacctttaaagttaaccacgcccctttttat
aataggataatataggtagataattaagaataataagcagttatttagttccaggattat
taaattctggcaatcaatgttagagaacaaaaagcaattgtacaaacgggatagattatg
cacaggcagaaaattgtacattcccggttaaatgtattggctcatgtttgtgttcttagc
atgtaggaagctgaggtaggaagacgtcactgagtctaaggccactctgtgctgcacatt
gagctcctggcttacagagtaagacccagacgggtcaaggacaccacaagcaaaccctta
ggggctcactgagaccgaaacaatagtcagggagtctgcataggtctaacctaggccctc
tgcatatattctgtagttgtgcagctcagtgttgtgtgggactcctaatagagggagcag
cagctacttctgacactttttcctgttttgtgacccaggggtggggagagggactgggaa
aagaggaggcagggaaaactggtgtctggataaaatatgagagaacaaattaataaaaat
atcaaaacccctcagagcaatactaattaaaactaagatagcacattcccattgtctcac
tgtgtgggggccctcttccgaacagcccgaaaactcactgcttctgctccacccaaggat
agctgcagataaggttttgttgacttgctctttggcctaggacatctggtctgtgctgct
ctgtgctctgataacagtgaggctcattgtgaaactggcatcagcttcagcagcaaggga
gagctttgttttcattctcctcttaccaaatgcttctggggcatctaatgtgcaccacca
atgtcacaattcattttaaaacaccacggtagcaccagcattttgtaaatgtgccaatca
aatgccatttccaataatgccagtgaattccaatgtggagtaagagagattagacagcac
atggcgctggcttaaagcactaacaggcttgtactgactgtcacacacaggatcctgttt
tcaccacttgtcccagtgtgttgagatcttggtggaaggatctgggtgtgagtgggaagg
tctcgtaacgaggaatgggagagatgaagatagctttcaagttggtaagtgaataccttg
tctcctgtttctgtatttatttcttacctagcttggattcctaccgctggatgtgtaata
catgtatgtcctcactagcttctgaaactgcccgtccccttaatttccactataactgct
ttgctagagaatgttctttaaaataactctgcttgtctgtctgcaaaccgtggagaaaga
ccagagaaaatatgtacccttttggccttagttctaaaggtcccctgtggctcggaggtc
cccagctgagttcttctgctggttctagtaccctactctcaacagagtgtctcgtattct
gtcccctattttctacaagaccttaatcttcctcccctccagacccgagtctgtctctcc
ttgttgtcctgtccctgttactgtgtgcaaggacccctctctcctggtctctaagaggca
ggcaacactgctggccagatgcaacaagctctgttctataaaagtgagcattcctagacc
tgtgcctgtcttgctgctctattttatcctccttcactgactctttctctttaccccgac
tctctgttgggaatcttatgcatttccatggttacataaagtcactctgttctagctaag
ggtaccatgactgacttcatttttcctaaccaacatcatctttgtccctcctttctgaat
cccacgctccatctgctccttagaacaggcacaatcaccatacaactcagtttaaaagcc
ttcagtggcttcctggtgcctgcagaataaaatccaaacctatctcagctgcagtctaga
acctggtctcaccctgacatcttaactttcatctctaacctcacctccatgaaccatgtg
ctggccacacaaaccttcagggtctccaaactacccactctatcgatgccctttctgtca
gagcttggttcaactcactttacttcttctaggaacagggttttctcctatgtgtataaa
ccacaggacgtatccaaaaaatgttttgaatgaatgagtgaatgaatcaactctgttcac
tcatttcagctcagaagcaagcgctcctttctttctgttctccgcagcattgataTTGAA
ACTGGTTGGCACAGC
Primer
(+)AGCCTCTCCCTAGCCTCTAT
(+)GCTGTGCCAACCAGTTTCAA


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