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Human element [ hs1714 ]


Position: chr1:232,753,930-232,757,436 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SIPA1L2 - LOC101927683

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACGCAAATCTTACCCAGCACttactgttagttcatgagacataagataggaagtggactg
aaggaagggagcatcagcagcaaacgaacaacaccccagagacctgggggcggaagggat
gctcaggcgaggcgagctctttttgtccacagacatccttcctaatgtcgcctcagttta
aaactcttgtggctgggcgcggtggctcacacctgtaatcccagcactttaggaggccaa
ggcgggtggatcacaaggtcaggagttcgagaccagcctgaccaagatggtgaaaccccg
tctctactaaaaatacaaaaattagctgggcatggtggcgtgcgcctataatcccagcta
atcaggaggctgaggcaggagaatcgcttcaacccaagagtcggaggttgcagtgagcca
agattgcaccagtgcactccagcctgagggacagagtgagactccatctcaaaaaaaaaa
aaaaaaactcttgttactccgcataattttaaaataaatcacttcagtgtatcaattatc
aagttatatattcctaagtataaagtctcaaaacaaaacacatgaccttgagttgcaaat
ataatactatgtgtatattctgtcaactaactgaaatgaattcagtaattttataccaaa
acgtcatttatatctctgtatatccaaagtaatttttcctttagttttatgacacagtct
ataaccttcagtaaattacagtgaggaaaaaaaacataatgaccatcttacgtgatagac
aaagtaattatcaccactttgaaaatactgtccgtcacttctccttaatgttgcttttgt
taataaaatgcatctctggagttgcaaaacctaaaccaggcaaaaagatgagtttgtatt
taagcagatcattttaatagagatagtactgtgatcaaaggaacaactgagagtgttctg
tatgtatcttctggtcttggagagggcctacagtttccctgcacacaagaggccctcaac
aaaaactcaaatcctaaccattttccaaagcttaactcaagttctatcttccttgaatgt
tttcctaaccatgcaaacccaccttattctcagctaaccacacagtctttcatctgaaag
aagctgtagcgcccatctatcatatggtctcatttacacaggaatctttttctaatacac
ctgacacatagccatcaactctgcccaagttagttagttcatcacctaagaaggcagtgc
attcatcacctaataaggtagcccatgctactacacaatagctctagtgattaaatcatg
ccctctgatagttctgaatcagtaacatcaggaagtttaactagaagaacactcaaagtc
cctccgaggactaaattctaagagtcagttaatttgctgactctgcctgacagctaccca
ggacgggatggaagggatggaaggacaagatccctgtcctcaggggtctcacaccctagg
gtgcccctgttaacttggaaatcttagaatgccagcatttaaaaagacttcaagatggca
tggtcccacatccttattttaaaattggattatagtcactgccccagaaagctgagggag
ttagacaaggccatggaagaaccccttatcccacttgtatcatctgcaatagcaggatat
tctactctgctcttaaatgctccaaatagattttttttttaagatggagtcttgctctct
caccaggctggagtgcagtggcgcgatctcagctcactgcaacctccgcctcccgagttc
aagcgtttctcccgcctcagcctcctgagtagctgggattacaggcacgcgctgccaagc
ctggctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtct
tgaactcctgaactcatgatccgcccgcctcagcctcccaaagtgctgggattatgggca
tgagccaccacgcccggccagatttttttaaattaccatttttctccgtagttttacctg
ttccaaaaaggaagaagataaaagttcacttttaaacacactaatgcttgcagggatgac
aaggaaagcaagtgcatattgccagaaccctgttccatgaaggtaggtgtctcgatgtac
acttctctccaccttcctcaacacctcccagggtgctacagcaagggaagtacagatgtg
ctaagcctttgctattggaataacaaagagcgtagtaagatgaaagcagtgtctcttgaa
actctcctagggccttgttcctcattccatgcacatatcctgtgccgactcaacatcccc
tctgctccacagcttatctcagaaagaactaagttacggtgccaagctaagaggatgaat
ttagaaagcttcacataaccagacgcacagcgacagcagccatcagacatcacccagatt
taactgccctaaaattagcagtcagagcaaagtagttactgcaatgattgcgtcagagct
attctgactggcaaactgccagttttaaacaaattgtcctgctttctctaccagggaaac
aatattttggaacagagccagctaagcatttcagtgaatgttcaaattctagcttctcta
ttaatgttgtataattcaatgacaaggtgaacaaagtctacataggctacatctgcaagg
gtgttattttctttgttgtaagcacttattctttgggtgagtaaagtactgtggatgaat
ccttttaaatatttaaatgcctgaaatgtatttagggattcacattcaactggcttaaac
aaagattatgcaaatctagcaaaatataaatgcaaaacaaaaattgttttcctcttatat
ttcttttaatcttggcaaagactcgggctaaaaaaaatgttctctgcatgatcacagaag
gacccactcacttcccaacaaagaatatataacctgattcaatcagtaaaactgctacct
caccacaaattacaaaatttctagttaataacagacaattcactggctgagagaacaggg
cagtttttagaccagaacaatgagctcattagcccaaccctcagcctccacttccccctt
tcagtgatagtgagtcggtaattccgccattcttatatgcacacaccttctttagttccc
tccctctctcccttcttcctttctgtcttttcattctttcctttcatcatgatttattga
aacctaccataccttacaagtgagctgtagaataaagaacactatagctggaaccaagag
aaatgggtttaaaacataaggactcagattcagaaaaccacactttcattaaaccttagt
ttttgtatctgtaaaagggaaaaaaatcccaccagccttataaggttctcgttaagtata
catgagagaacacaaatgaaagttcaagcacggtaacattttacactcgcctttaagaat
atcTCTCCCCAATTCTTTATTCTCTTC
Primer
(+)ACGCAAATCTTACCCAGCAC
(+)GAAGAGAATAAAGAATTGGGGAGA


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