Human element [ hs1701 ]Position: chr18:72,446,892-72,449,761 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: ZNF407(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GCTACTTACCTCTTAGTTGCCAAAtatttaatagttttagaagtgaggattgaatatatt gtcctttacatattgactagttacagtgaaagaacattggttgaaatgaaattagaattt ttctttagcagctagcaactggaaaggtattttctttagttctgtctgtatatttttaaa acaattgtattgaaggaaaatactgtatagttgttttaatcatctggttttcttgtgatg caccagtctttaatttcaattgacatttgctttcgatgcccttcttttaaatgctaaggt tttatgctgtgtgatatttgtagaatattttccaagacctgttatgttgtttttccacgc ctagtagctgatacagttaagattggcaagtggtcctcattttagttgagtaaaatatac tagcttaaaatggatatgtgctcaaaaggagataattcatttcagttgggagaactgtaa gccatgatacatgattttccttaataaaattccccatctctgagacagtactagttctta ctttaattactggctgccgtaatgtttcctatccataactgtctacacaatggactgttt ctgagcagagggtatggcctgtttactcaaccgttgaggagagtgcccaagttgtaccaa gtctgaactgctgcacaggagagtgtccttcatttaaatatttaaatattaatgtttaat tgtataggcagaaaacttcaatgtcattttaaggatatgcaactttaccagagactcttt gtccatgatcaactttagaggcttgtcttgaatcttaacattctttggaggcatgcaacc ttgtggccatattggaaagtttgagtatatttatcttcgtatttcctctttgccccacat tttgaaaacaataacagaaaagctgttgtcaagggtgcttctctcaaaaatggcttagtt gacattagctgaaaatgagcagaacgacactaactactaattgattacagtaattacaca gtctttggctagtttgtattggcaaactctatgtactcctggaataaatgtgaacttgca gaatgcaaggaaaaggtcactctcatttgcatgataggcttcattagaatatgctaagga cgagacctagtgttttatgacttcgggtgatgaatagctaccatattactctgctagatg aaagtgtgtttcactcaccttaatttacatgctttttttttaatttcaagaaaaatattt tagattacagcaatggagagcttgctgtgttttgcactcaattatattgtgggtgggttt tttgagatagcaaaatattttaggtagaattattttgaaggatatttctaaagataggat tagaataattataaagggctttctacattagatcttctagcattataacttttgtcagta ataaaagaaaatggttttttagtggttgtttaaataaaatacaggttaactcattggagc ttaaattttaggttttagcttgctttagacttattacctagtgggcttcattgagtccta gaatgcattgattttcactttaaaataatgcagtttcatcacttcattaattttttccct taacatttttgcttaattagtactatttctgtactgagatttttttaacatataaaatgt agatacaactgttctatgatggctgtttttgccaaaaacatgcctgcccaggatgccttt gtcagttgttttcatggcatttgcttggtggaaaagttgtgggggttatgtagaaataaa aacgagaataaatttctgcagccgatctaaatacatatttttaaagtcaagaattatgtt tcccattaaataaacgttctcatttatggtctccgttcatatagtgatgggtcctattag ctgtcattatccttctattctcattaggagagaaaaatagtccaggctcctaaaagtatc ttcatgagaagtatcagctcctaattagcagtgactgtaatcttttggaacacagggtta acacttcctagataagttgctattataaagtttcttcatcttttaaaagccattcctgct agtaaaactaggtcgaaatgaaaaagtagacagttttttcttttatcaaatgcagttttg taataaaattgtacgatgagcttgcacaagctttttaaaatatcattgctgccactgaat acatctataatttatttattcaagaatgttggaggcatttttgatttatttgtttttaga gaagttttgttaagcaagataatgagcagagctggtgttaatcatttactatgcaactct aaagaatgaaaattttgcatatctttagcactgttggggaaaataaattcactcagtgct aatggtctatctgtgtaatttttgaaaatactatcttactctggagaaatgtaacacacc attgtgctttgctaaaagctaaactaatcaatacataattacacatttatatgtacatat gtattaagtaattataattgtttgttatctgtaaagatgataaattaacatgtggttggt cagtgccttaggtgtctgctatacttcttcttatataacttgtggtctgtattttcaaca aaggaccatgagtgtgtgtgcagtgcatgtgtgtggatacatacgcagacacacaccctt acgtttaggtatgtattttcagcagaggaccacagatgcgtgtgtatatgcacatgtgtg tacacacatgcatacacatctttagttgtatatttttaaaggatcacaattaccttagtg tctcataatcttgtagtaatattgcttttaAAATTCTTGGGGATGTGTGGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.