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Human element [ hs1701 ]


Position: chr18:72,446,892-72,449,761 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ZNF407(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTACTTACCTCTTAGTTGCCAAAtatttaatagttttagaagtgaggattgaatatatt
gtcctttacatattgactagttacagtgaaagaacattggttgaaatgaaattagaattt
ttctttagcagctagcaactggaaaggtattttctttagttctgtctgtatatttttaaa
acaattgtattgaaggaaaatactgtatagttgttttaatcatctggttttcttgtgatg
caccagtctttaatttcaattgacatttgctttcgatgcccttcttttaaatgctaaggt
tttatgctgtgtgatatttgtagaatattttccaagacctgttatgttgtttttccacgc
ctagtagctgatacagttaagattggcaagtggtcctcattttagttgagtaaaatatac
tagcttaaaatggatatgtgctcaaaaggagataattcatttcagttgggagaactgtaa
gccatgatacatgattttccttaataaaattccccatctctgagacagtactagttctta
ctttaattactggctgccgtaatgtttcctatccataactgtctacacaatggactgttt
ctgagcagagggtatggcctgtttactcaaccgttgaggagagtgcccaagttgtaccaa
gtctgaactgctgcacaggagagtgtccttcatttaaatatttaaatattaatgtttaat
tgtataggcagaaaacttcaatgtcattttaaggatatgcaactttaccagagactcttt
gtccatgatcaactttagaggcttgtcttgaatcttaacattctttggaggcatgcaacc
ttgtggccatattggaaagtttgagtatatttatcttcgtatttcctctttgccccacat
tttgaaaacaataacagaaaagctgttgtcaagggtgcttctctcaaaaatggcttagtt
gacattagctgaaaatgagcagaacgacactaactactaattgattacagtaattacaca
gtctttggctagtttgtattggcaaactctatgtactcctggaataaatgtgaacttgca
gaatgcaaggaaaaggtcactctcatttgcatgataggcttcattagaatatgctaagga
cgagacctagtgttttatgacttcgggtgatgaatagctaccatattactctgctagatg
aaagtgtgtttcactcaccttaatttacatgctttttttttaatttcaagaaaaatattt
tagattacagcaatggagagcttgctgtgttttgcactcaattatattgtgggtgggttt
tttgagatagcaaaatattttaggtagaattattttgaaggatatttctaaagataggat
tagaataattataaagggctttctacattagatcttctagcattataacttttgtcagta
ataaaagaaaatggttttttagtggttgtttaaataaaatacaggttaactcattggagc
ttaaattttaggttttagcttgctttagacttattacctagtgggcttcattgagtccta
gaatgcattgattttcactttaaaataatgcagtttcatcacttcattaattttttccct
taacatttttgcttaattagtactatttctgtactgagatttttttaacatataaaatgt
agatacaactgttctatgatggctgtttttgccaaaaacatgcctgcccaggatgccttt
gtcagttgttttcatggcatttgcttggtggaaaagttgtgggggttatgtagaaataaa
aacgagaataaatttctgcagccgatctaaatacatatttttaaagtcaagaattatgtt
tcccattaaataaacgttctcatttatggtctccgttcatatagtgatgggtcctattag
ctgtcattatccttctattctcattaggagagaaaaatagtccaggctcctaaaagtatc
ttcatgagaagtatcagctcctaattagcagtgactgtaatcttttggaacacagggtta
acacttcctagataagttgctattataaagtttcttcatcttttaaaagccattcctgct
agtaaaactaggtcgaaatgaaaaagtagacagttttttcttttatcaaatgcagttttg
taataaaattgtacgatgagcttgcacaagctttttaaaatatcattgctgccactgaat
acatctataatttatttattcaagaatgttggaggcatttttgatttatttgtttttaga
gaagttttgttaagcaagataatgagcagagctggtgttaatcatttactatgcaactct
aaagaatgaaaattttgcatatctttagcactgttggggaaaataaattcactcagtgct
aatggtctatctgtgtaatttttgaaaatactatcttactctggagaaatgtaacacacc
attgtgctttgctaaaagctaaactaatcaatacataattacacatttatatgtacatat
gtattaagtaattataattgtttgttatctgtaaagatgataaattaacatgtggttggt
cagtgccttaggtgtctgctatacttcttcttatataacttgtggtctgtattttcaaca
aaggaccatgagtgtgtgtgcagtgcatgtgtgtggatacatacgcagacacacaccctt
acgtttaggtatgtattttcagcagaggaccacagatgcgtgtgtatatgcacatgtgtg
tacacacatgcatacacatctttagttgtatatttttaaaggatcacaattaccttagtg
tctcataatcttgtagtaatattgcttttaAAATTCTTGGGGATGTGTGG
Primer
(+)GCTACTTACCTCTTAGTTGCCAAA
(+)CCACACATCCCCAAGAATTT


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