Human element [ hs1695 ]Position: chr9:22,127,677-22,130,448 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: CDKN2B - DMRTA1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GAGACAGGAGGGTCCCAAATacgaactttgacttaacgaggatgattactagaagggaaa gattgtggattcattgatgagatgttgaaccatgaaaactctaattgtagaactcacttc agactgaattgacttggctttcagtagcagaagccctttgtctacttctctagtattgaa gtgaatgcaaatttctcaatgtaagaaaagtagagtggtgaaataagagtgtgggttcca gggtcagacaactgggtgcataaaaagggtaaggatgctacaactggtaagccctgtgag aattatttaatccttccatgtctcattccgctcatctggaaaatgatgatcatactaact tatgagatgtgtgtacagactagatataatattaaaacatttctgatacctatgcattat attggatcaatatatatttgcaataaatgatcaactttttattaatgaagttagtactta tttcataacgagattgtttacttctaatttactagtattgtcattattactgttgctgtt atactgctactgctgttgctactaactctttatgaagtacctaatatgctctaagccttg ctctaggtgttgtatatgaagtatttctaaacctgaaaactatctaagatggctcagtct agcccattttatagacgaagactgaagccaagagagttgaaataatgagtaaagttgaga tttgactttgtcttccaaacaactagaagcataaagcaatggaccaggttccaaagtgac agggaggggcattagtttggcccataggctgcagagcctgtgaccacagagccctatata ttccagtggtgaattatgtttgggaatgtggcagaccatatggctatggcatcgttagac atgaggtggagagaggcagatgtgtggttactcgattgagttgagagatgccatggaaag gaggaagaagagcctgagagagcaacttcactcatggggagagaagcttatgtggagata agcttcacttcactaatggggagataagcttcacttatggggagacaagtaaggaagcag ggatctccagaggatgtggagtatgcctggtactttcattgttctttttccttattcttc tttattcttttcattattttacctaggttagatgttaaacacttcctgttgtttagtcag gcttccttttctaattataagactaaacactaagatttcatttgtagatataattattag agaattttgataaaatttccaagcagtgttccctctgtttatcatcgtgttccctgctgt tattagttcacagtttggtctggaattactccagttaatcttggggtttcaggagagaaa ttgtgctcagggtacatgagaagagaaagtttagaaagcgaagggcttccctgtctagtt tctagctcagaaaagcaaagatattctactttcatatgtatgataattggagctgagctg actttaaaaacagataatttttcttttttatccctaataaataatggtgcttacagcaat gagtgttgctggtaacagattccaccaatgggtgtggtgtgaagtttagcatttgtggat tttgcagcttctgctattgtctacagcatttcctctcttgtctcggaggttcatactttc tcaggcaaggacacttttaactccagataaatgtctgggttttctcactccaaggataag aaggtgggggtgatggagtggtggtggtagttgtggagttgtcttcctggcagggatttc attgtgggggaaagtctgtctttagaaaagaaatgtaaactgggcaagtagtctcatcag ttaaatgatttccttgttgacataaggtgaggaaaagaagaacaacttttgggaaaagta actgtgagaatacaagggaagaagaaaaataaggggttgaacattgaggaagacttatga gacagataaagtataaaggcaggtaatttgttctttcaatttggcatggggacagtaaaa attttttcttactaaacaaataaagcccatgtatttcttctgctctgggagcaccaatta tattgagcctctaaataaagaaagtcaacatccacaagtgttctaaattccatctcgtag tgagagtcctgaaaattgcaatagctagagtcaatacttggagtatatgcataagacgtg gtgtctcaaataggattaaggcctactcttggcatcttctgttattggtgttgtttctct gtattgattggtataacgttagacaaaactgcaggtcatctttgagaaaaactcagtata aacaatgaaaaaaatgtgtagctgcacatgtaatttgcatgtaacaaaaccaaaggatgc tttagatagtaacagcagcctgtactttactccaacccattagttttatgataaatgtgg tctggggaagtgctcgatctaggttgttcactttgtgtttttgtttctttctatcattcg ggtgttgagtcacctgtttgtctgtgtcagtgtcagagcactgggtcacatcctgcattg tccaggttttattggtccctttcttaaattaaagctgattttccacttaaagagaattct gtctccttctgcaattgttcaaagtctagcatctcaagtgcagactctaaactgtatgta tatgtattgtgcaggctatctatcttcttagctttgaattctctagaaataTTCCAGAGG TGTGATTCCTCTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.