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Human element [ hs1692 ]


Position: chr21:17,968,630-17,971,417 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR125B2 - C21orf37

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CcaaGTTCTCTCTGCTGGCTCTGCctctccctctcacctgatatgttctccctctttctt
tctctttctctccagtgttgacttcattctcaggtaagctttctgaatgtggtggcaaag
atggccacatacaacttcagacttgcatcatgcgtcatcctacagcctgtgaatccagga
aaaataaacaaacaaaaagattctctttatgccaacatcaatttcagttgtcagaaaatc
ttggattggctctgttttggtgacatgcccatatgtggatccacttatttgataaacaag
gactactctgattggatggccaatgtagggaggcaaaagacgactagcctatcaaggtca
tgaggaatgagtgagggtctgtcagtcgtagaaagtgaaaggaatttaaagcaggcggga
atgtaatggaacacacaaccaccactacacattttttaattactgagtataatgatgatt
gataggcttttgaaaatgtttgtcttggtaaactcactggtacctatcaatgtgtaggca
acattagtttattttgccaaatgtcctcttacagcatggaaactataaaacatctgctgc
agcaaatctcaaccttgagtgtcatgagattaattacttttattaacactttccataagc
atgtaatatatgacatataccaggaaagtcagcatttggtctcatttaggaatttgaaat
tttaaaaattatttaagattactagaaattgtttggtaaagaagagatgattattttttt
ctgtagcctattgtgtctatccttaaccaccatatgatcagaccatttccttacagcaaa
ttttatatcctccccacttttacctctaatgttagagataattagtgctgattcttggaa
atttttatttttgtttatgaattaatttcttcctctactactattatacatatatatatg
cattatatatacatatgtgtgtgtgtgtttgtgtgtatgatgtatatatgatggctacag
ttataaaataaggatgttagattcttattccatatcctttaccttgttgctcttttgttt
atcatagtatgacctgggtggtttttaacattttaccatcaagaactactatttaggaat
ctttctcaatgaaaaagagattaatttactatgaataatggttctaatgcaaaacatttt
gggcttttgttgtgatgcagatgagcaaagccataaatataatttagagagtttgaaaat
gtattttaacattcacaattcttcttactaattaatcaaattacaaaattatgctgtggc
ttccagtatattaaaataagttgtcatatttggaacatctgtttatggtcctattatgaa
tatgtatttctaaagggctgaaatatagattgccataaataatgtttgcaatttagtccg
tggaaaaatgatacctacttcccttcacaatgcttgtttatttcccacgaagtaaatctt
ccagattgtattttatcattttcttatcaagacggaggaaaaaagactcgggtcttactt
aagccttgctgattggttaagaaaagagatggctgtcatcggcagccttgccagacactg
taccgtggctccagacagtcagctggtactatcgctttgtctcaactataaatcacagtc
tcgtaatggccaaggctgacaccttgacattttcaagaagagtaaaagacctgatttgaa
tggaaatcaatttcatttcacaaatcttgggtgactactccaagccttttcttgtgtctt
cttgagacttatttgggattttcatgatcatcagaggattatttgagtgttatattatga
ctttttaaagctataaaaccatattcttacttccttcttcattcctaacatgagaaaatt
gatttttaaagttttatgtaagaaaaatcactaataagcactgatagtttttaaaatggc
aatagcagccaatgctgtttagttttgcaaaacttttgtaaaatgttctctgatttaaaa
gtacaagctgtgtacacacgtatccagattaacctttgattacctgataataaatattag
caattatcaagtgattttgcacttcaatcaagcaggtctcaatgaaacttaaaatctttt
gaaaagtattttcacttttacgttcttagacataacaagaaagttttaagccttaaattt
taagtattctagagccaatgatgagtaaaaagtacttaattatgttagatgggaccttgc
attaaattgcatccgatcttttgaccattcgacccaagtgacacagaaataatttcatac
tttactagtatgaaaagaaattctttttggggcttttaggagcttggcattgaatgttta
aaatgtttaatatacttattctgttacatctttctcctttagaagaatactaccatttct
ttaaaagcacggaggggaagacatttcttctttcctggtattttgtcttgatccctctcc
aagagtgatctaagctcagtaaagccttggtcttctcgacacaatattaatggaaaatgt
taaccttacctatctctcttttttaagtatggagggattaccacaatgccttgtgatgat
ttctcttcatcttcattgttagtcctcaactttgtctcaaatcataattttaaacagata
aactttgattgttaaattcattattttgtaaagccctatgaacgagtgaaattacacaca
gttacaaaCAGGATTCCCAACCCTTAAA
Primer
(+)CACCGTTCTCTCTGCTGGCTCTGC
(+)TTTAAGGGTTGGGAATCCTG


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