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Human element [ hs1691 ]


Position: chr4:96,878,170-96,879,875 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PDHA2 - STPG2-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAgCTGTGGAGGTCATTAATGCAAAataggaattttagaggcatctaaagaattaaagca
tttattttagcgcctttatgtataaaaatgctttagtttcgctctcagaaattgagcaca
caatgtccagtggcttctctgcaggtcaactcatggtagtttgggaaccactctacgaag
tataagcttctttaaaaatgcttatgaatgtcttgtgaaagacttgatgcacagacagtg
caattccggctaaaatttcccctgaaagtcagagatgactcattttcattgtccatttgc
taacaataacactttagtaaaaaaaaaaaaaaaaaaatctttaaaggtaggatgaagaga
tgaagataaaagtaaagaataagatgaatcttaaaaaaagctctgtaaagaaattcacct
gacataatatttgagcctttttcaataagtggagtttcgcctttcttatatgaattacac
tcagggagagaaaaggagtgaaaagatgcctgcaagatgtttcattcaaatatgagagaa
tacaacaaaagtccattaatacgactatcaagagaggaataatagagctaaaaagtgctt
acggatccagaacagcaaaagaagatacaggtctcacaaatacctctaacataagttata
aaaaataaaacatctttttgtgctttaaaatctgtgacaaatgctgattaaattcaccct
gagagcatgtcaatttgaaaaggggattataaatgtacatgccgccaggtgctctccttt
ctaaggggggcagtgagtgtatccatttaaatcattcaaatatgtatggtgtcagcactg
gcacatttagaatgagagcaaaactggatgaaaattggaataacattggccttctggagg
gttagggaggctttcctgcagcaggttggcaatttgtcacatcagccccttcatgaacta
tcaacctcattaccgcggttcactgtacagttgccccttgggaatctaatactaatagca
tgtagagggtgatgaggcctgtggtctcaactacttcattattgattcacttaaaaatat
tccacctacatatttgaataaaataggtgatacattagaaggggaaaaacaccaaaaaca
tctacaatcaattgaagtaggggtaaaaaacaagaaagggatccaggcagtaatagcacc
acaaaagcaagtcttggaaaggtagagggtgaataattttgtgtgacagctaccatttat
ttattctgttgtgtgagaccgtgcatcaacctttaacagctataactgtacatttagtag
ggctactaagtgaaataggtcttggatatatttttaagaccctgcaaagacgtatagagc
caggatgtttgaaggacatatatttaaccagcaaaatacacattgagagtcttttcaatg
cctttagccagaaaagaggataatggttcatttctaatgttccaagctgatgagaaatgt
atgcatatatattaacacataattttctccaatatatatagatacatataaatatataaa
acaaacatttaacagagatccatctctggagaaccagaactcacctgtgagaaagtatct
ggttacttgaagattctctcctcatttagcagcaatggatttttactatatcgattgttt
tAAGCACTGAAACAACATATGTATGC
Primer
(+)CACCTGTGGAGGTCATTAATGCAAA
(+)GCATACATATGTTGTTTCAGTGCTT


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