Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1685 ]


Position: chr1:74,054,059-74,056,569 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Tns1(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AACTGGGGAATGGACTGCAGtgggagaggctactatcagacagcagagaacttcctgaat
ttgctgtgaaccacagggtgggtaaggaagctgcatatcctttcttcaatgtttccccca
aaacagacacgcatgcctttccctctctgtgcacgtgctacctctcgctgctgactgagc
caagaagagcatgtcctggaagattgggaggctggcccacctgcctggggaccatgtagt
agaaattcattggtggcctgctgggaggctaggctggggggaggagaaaaatgtatctgt
gggctgctgttcagaggaaggaaatgccggggcttggggatgccccagcctgagcccagg
gctcgggggcaagagggagggtgcagagtgcagactcagcctccagaggaacattctgtc
cagaacacttcaaaccctcagctctagcttgccagatctctctgctcttgtcccaaggga
agtctgtaatctgggcagtttggagccaaaaagaccccgtggcatcacatctaccaccac
attgatgatctgtgaggtcacccagcactacctatcttggagggggaagggcctgggagg
cagaggggccaaccagaaggaactggaattgctcagacccaagacacagggaaggctatt
ctgggctcactttttccccaaaatagaaccataagtagatatggggttgggtgctgagag
gcagggggacaaggcatagcatttggggacatttagcagaatatgacaataggctgcata
ctggaggcatggcctcataacatccccatgagggcatcctctcaatagagataatgacaa
cagcaacctataggcagcagcagtgacagaggaagccagagactctcaccttaaaagctt
gctttgggtcagctgcctgcccaggcttcctgagccttcattctacgtcaaggtctcagg
ggctggagaaggaacatttggctcctcttctggcaatttcccggagggtgcttgcttcta
tgtgagcccaggtcagccctccaaagctgtgtccctgctatgctccaccccaaagcaaca
agaggcaacaaaatgggcacgggaacagctgggactgaagcaggatcctgggcaggcagg
aggcccaggtggcagggacgctgacctaaatgttcagggtagattgctgccaaggtcact
gcctctcatagacacactcagccatcaaggggaaaagaacaggctctggtgattaagtgg
aaagctatgctgacttccacacacccccgagaggagcgccaagcaagtcccttcctgtct
cagcccctcctccaagccaaccctaaggggcccagcactacaccacgggctgaggctggg
acacccaggacctcctctccagccccatatcaggaccaggctagaatactgagtattccc
tctgatcacagctctcctcccacagaggaccaggtctaccataaggctttgcctcctccg
catccttgaactaatctggcccagaaaccctaagaccctactggatgtctaccctagtcc
cttccacctgccttccccttcctgtcaagccacccccagctggcagcagattcccactct
aaaaccctgccatgggtcaattgcctgctcaaggacccataatggcccttagtacttagc
tctcaaggtcctgttctccacccagactgtgaactcctctaagcccggcccctccctctc
tagtgccagagtcaatagctggccctttcctctccagcagagtacattcccatccccatc
ttgccagtcagggccaccaagtaggtgtccagaccaaggttatacacaagatcacagggt
ctactctcccccagcgagagcaggctgtctgacttttataccatatttgcttgcttgctt
ctgcaatttgtaccaaggtgtgtgatctaccatcttctagagctccccctactccttcct
ctaaatcagcctggccacagagaacagactttccaaggcgtagcacaagtgagttcattt
attctcctgaaacccagggccccccctggtgagagtctagagttgggcacagatgcattc
tatggtatggtttccctctgccttgccttctgatctggcaaccctgtgtgccctggtcag
ccatcccaggccagacttatacctcctgggcacagctctgccccaaacaccaggctgcta
aagcaggcaggatcctctcccactggtggtcaaaaagaagctttgacctctgacctctgg
ggaccatgacacttgcctgccctgagaaaagacaggatgtgagcgggcctgaggaaaccc
aaggaacattcgctggcaccccacacctaatgggtgttagtgactagtgaggggttccag
cagcagacatcagttatcagttccccatcccaagacagcccaggtgggccatgtctgatg
tttgaaacctcttcctgcctcacaaaccaacTAGCCCCATGACCATCTCCA
Primer
(+)AACTGGGGAATGGACTGCAG
(+)TGGAGATGGTCATGGGGCTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.