Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1679 ]


Position: chr15:72,850,849-72,853,749 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Trappc9(intragenic)

Timepoints:
e12.5

Expression Pattern
forebrain (4 out of 5 embryos) 

Embryo 2


Embryo 3


Embryo 4


Embryo 5


Fasta sequence
CCAAGATTCCCCAAGCCCATgagaccaaagtgacttgcaagtctccaaagaggaattccc
aagtatccctctcacccctccttaaaaattacagctgcctgcagggcactgaggtctggc
ttcttttatcaccttttctggttagagtggagatttgaaactcagctcaatgggcagtgc
ctttccaagttgggagggggaggggagggggtagagcagagctggcccccaaggggtctc
tgcagacccctggctctggaatgactgagcccccctcactgtcctcacagacttccactc
tcctggactcttagtcaagccacacaccagaatcctgttagaccagaaatttctcagttc
tctctctctctcctctcaattccagaaaggaatctagcaggtgaccttccttctccaccc
ccccccattcaatggtttccttgtaagagctgtggatccccccacggttcccccacagtt
cccccacggactgactggccctggaagccattggccagttggccagctttgacctgtcac
agcattacctcagccccttccccagatgacacccttccccactctcccacccttctgact
ctgagctcaacctgacaggagcactagggatgcagtcactctggtgcctaccaggctctt
gcagggtttccttagcaacagcttcattaaggaaacccatcaaaaaagaaatccgaggag
gaggaggctgttcttgcatctgaacagagtagcctgcataaaatctgaatggctttgcaa
agaaaattaaccaaagacaaagaggttgaaagtcccctctaaagtctcataaaggagaat
gttttaaagggcaccaattgttctggaacttagagatgtgaggaggcggaggacggggcc
acgctgcgaccctcagaagctggtctagttttccagacacttcctcagtagcactttctc
gtaaggtcacctgccattttctgttgaaaacaaaaatgtattcagtccctcaggcagcct
agggtgggggaggggagctgccaccgggttgggcttttggaatcacacaagcgagggagc
gagggggactgaaagaacaatgggagactttgtgagctgagctgggtctcacccctcagt
ttccctgtctttaaaactggctgcaagtggtgaggaaaggaactgacgagacctttctca
gggtctgctcagcaccagatggagccgccacaagccccaccagccagctacaggggagac
agtcatcgcagcctgtgcatctttctttgttgcaccttgctctacattgcaacagtgctt
atgctcctgggatgaaggcctcccgagctgctcctccgcagaaggtatccaatgggagcg
tggtctttgtttctgtagatctgactcacttgggaattgtttgcctccatgtcttttgtt
tatcagccggtttcccctcctcagcgccggccagtgtggaccatgactgtctgcagctca
ctggacttcaggagcaggctagcaggcaggcagacagaaacactttgcctagagtcactc
ctgcccatcccagaggcaagggaagggaagggaaggaacacaaagggtgcatgaacacgt
gtcccagggacccctcacctctaagccaccatcttctttggtgcctgaatcattgttcct
tttcctaacctccctctgcagataggggtggctacatttagaccacagaatctcaaggaa
cagattcctacttcaagaagtctgtgaatggatgccagtgaggtttgcagcctccttgcc
accctgctgttcccagacggtgtgcagcggcactaagtaaaggagagaggtggctgcttg
ctctccacagaagacaagctgagagggtgctgcatggctcctctattcacaaacagggga
aaatgatgactcaagtcccagcccctctgttctcatatgaaccttgtcatttgcctgtga
aaccctcatgaccattgcacagatctgtacacagccagctatttgttgccatttgggagt
gccagataattaccagaaatcactcgcctaaaccagccaacacacgcaggtcaccctgtg
cctgcacagggaagagggactctgcatctattttgcagagcaccgataaagacagtttta
tcctccagttctgaggttttggatttttgagacagagtttctctgtgtaatatccctgac
tgtcctggactccctttgtagaccaggctggcctgaaactcaagaaatctgcctgcctct
gcctcctgagtgctgggattcaaagtgtgtggcaccaccagctcatgcagggattctgaa
agacagatggaacttgcactagtcacatctccattccttcccaaatgtccgccatttgcc
gccgaagtccttcgttaccatcagctccacaatggatcacacttgattaagaaccaaaag
cttgttctatttcagaaaaactccaggcccttctctttactgtgattataaaatcccacc
agaactcattattttgctgccttgtcaactagcagacaaacatcaggatgagacaaggac
cgcaaagtgccttcctcctccggcagaattcaaaggctggtaaccgccctgtgccgcagg
cagggccacaattgccacagagcattgctgccctctagtgtttgcctgacgccgagcaag
atgatagcagagctgatccaaactacagggccccactgtgaatagatagcaggttgcagt
aagtccagatctcctccctttaatctgcaaagcggacttcagtaactgcagagagtgagg
gcccacaggtctgtagaagaggagcagggctgggaagcctggcagccacccactactcta
gCACCAGCTAAGCCCAACAGA
Primer
(+)CCAAGATTCCCCAAGCCCAT
(+)TCTGTTGGGCTTAGCTGGTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.