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Human element [ hs1677 ]


Position: chr7:25,533,607-25,536,880 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NPVF - RNU6-16P

Timepoints:
e11.5

Expression Pattern
hindbrain (rhombencephalon) (6 out of 6 embryos) 
midbrain (mesencephalon) (3 out of 6 embryos) 
neural tube (6 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 4

Fasta sequence
GGCTGCGTGACTATGAATGAcgtcgtctcaccagtgcttggggcatgttagaaacataaa
ttttatttatttattctctgcttcctttcaagaggattagagagtatagaggtgccaata
cagtttaaaataagacacacagagaggatcccatcaaaccgaaccacccctcatactgat
tgagcacctactgtgtgctagagcactctgcaggtgactggaggtaacgggataaaggag
gccactctccccaggagctcccaggttgggaaatcgtttctcaaagtatgatccaaagac
ccctcctgatccctcatatagaatcacctacagtgcttctgaaaaatgaagaaaaaaaaa
agaagattgctgatccccgactgggagtctctcctaatgcagaatgtttgggcctctcaa
ccattcaccacctctccatttcatggtcatgagtgctggggtttgagaattttcagaggg
gaaacaggattagcaacagtgaattctgaagtgctgtaccagtgtaatggtctattcagc
agaagcttggaggttaagaatggtgactttggaaagcaacagacctggattcaattgctg
actagctgagactgtggtggaggcttgcagtctctctgagcctgttttatcatttgtcca
atgggtttaaagttacctgcctccaagtggtgttgcattaaataagacactgttctataa
gaaaatgcttaacacattgcctcattcatgggaggtacttgaaatgcagcggccattgtt
gtcatcagtcacatcacagtctaggtcctactttggcatcaatcagatcccagggacata
acacaggtgttcccaaggccaaggtcatcccaggcttcaacaaaaccctgaccctggagc
ctggccattcacctacaacagctaagggctgaattaaccaagactcatttttcccagcat
gaaaaaagaggacatgccctccttctttgcctcttttcccttgtctcccttttctctctc
agaaagaaaagatgcaccaccccaggaaaacacagtggcagaaacctgttaccagttttg
tcagatcccaaaatggcagatggccgcagcctgcagcctctcactgcatccaagatgtct
tcatctatcttcctaggaccccagcaaaatgtttttggcaaaagcaggaggaagggataa
aaattaagtataaggtgctgcattcataggggcttttatgggtctggatgtgtaatgatg
gtttaatggcaatcaagaggcaggtaattaggaacaagcggctctgatcacccttgtaca
cagccacagatagctcctccacactcctgaaaccttgtttgctttctccgaggcagaaat
cccacaaggtcttcacgttgccagctgtcgagctaacgaactgccagtgtgttcttgaat
gggagcactcagcctaccgaggctcccctgagcagcttgcgctgtcttcaccatgtgatt
gcttttatctggccagtgcaggagctgctcctaatcaccctgctgtttgcctccaagggt
caaactggggaccatcactacctaaacaaatgaggaggatgtcacctttgggggagactg
ataagcagttggcaggcaggccacgggcaagagaaggcgccagcagccagcagtctgcaa
aggccgtaaatatgttacactctcagcagggagatgggcaatataggcaccaagaggcct
ttgtttaatgagctgtcagaaagcaggcatgaaattatgtttgaaaacatgtgcaagctg
cagagacagagcgagggcctataaatggccctcttccttcatgctggatgttttggagca
tcttatcagtctgagaactgtcataggatgaaagctatcattagcaaactaatggtgttt
gaaagctacaaatttttctatctcttctccatttttgacttaaatggattatagaaaaaa
aatcttaatggtttttttctttccttgggattttggtaaacatgcaaattggaagagaac
caaaaacaaaccgcaaaaaaagtatctctggaagaacaaaccaaatggttatacttagaa
tctctgctcagaacagtcagctgacattcttttcaattctgttgagactctgttcagaga
aatctaatgcaactccagccagcattttatttcaatcaggcccataaaagaaagcataaa
tataaaatagattgttctcctataatctgagtattaaaatttgtgggtaggtataatatc
acttctaccacatcagctatcaaataatagagaataatttttcaaagactagaaattatt
cttgtgggtcccatggttgtgaagtttatttctattcagggtgaaacctaaagatgttta
aaaatctgccaggactgagaggcatcgctgatttagggcgtatttgggccccaattccca
aattctgaaaggatgcatgagggcttggttgccatacatgggtctttttccttcagtgca
ccacaaccctgcatttcctccctctgatcaaaccaggcagccagaaatgacttgcacaaa
ccacttccccattaaaaggcccaagactaaccatctgaagctgattcaggagaggtcgcc
aaattagcagggaatagtctcttgagacccatcttctccgcagattgaacagtagcaagc
tgctcccttccagatttgagaaaagaggaagatctgaataggaaataggaaatagcaaag
ttccattgaaaaggtaaaggggtgaaggttagagaaacagaaactaaaagacaaagaaaa
acaggaagaaaaaaaaatggtgtttgccgtacaccatgcatcaataactgacattcacag
gacactttgttttcctgccttttatgctggtcccctgtgtgtagatgagaaatacaaggt
acctaaagtcatccagccgatacgtgagccagccatggagccagggctgggaacccaggg
cccacgtccctcccacgcgggtttatcatctttgaacgcattctgcaggccctctctctg
aaggctgcgcatggattctacgtgcagatcctgacacaatgtgggtgctcagtctgcatt
taatggggaaaggagagctttagtccacagaagagacaagagaaaatcaagacagaaaca
aaattggaaggagtacaagcatggctattctgtgtccagaatagggcctgtgaggccatg
tattccttttcaGTTTCCCAAGTGCAGAGAGGaa
Primer
(+)GGCTGCGTGACTATGAATGA
(+)CACCTCTCTGCACTTGGGAAAC


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