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Human element [ hs1674 ]


Position: chr1:41,710,596-41,712,937 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SCMH1 - FOXO6

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ttCCAGGGCACAGCATAATGTAttaacagttctgtgctgttcaattaaacaactaattac
acatgggtgttattagttgcttaatgtttggattttaataaggggggttaaaaaccaaga
ggcaactggagagtggaattgggctatgacagaccctgtgacctttgggttacaggtgtg
gggaagccaagaaatacagaggcaatggagagggaagaaataggcaagttaatcaggatg
taatttttttttaaaggaggtatgctaggaaaccccaggtctgctcttttctacattaca
ttacagcaaaaaggagtgattattctggcactgacagaactgacaaaaacagtagttttt
gttttgttttttgtttttgttttttttcatgttgttgatgacccagtagaagagttggta
aaggaaatgggaaagatggtttctgatgcttaaagaaagtatgtgtgttgcggggtgtgg
gggggatgcattgaaatacataagagccttcaccacattaagtcctacacatcaattaag
actaccttccccaggaacttcctctgataccttctcttccatcctcaccccaggataaat
taaatgcccctcctttcgctctccttgtagcctggcaccttcattcatcattgcatttac
taggatctgtgcatatcattttcatttatgcttatctttcacctgactgtaagctccaca
gattggaactctgtctttgttcttcattacatccacagcacctcgcaccatacctggaac
acatttggtgatcagtctatatttatagaatgaatgtgcacagtaggaccctttcagacc
caagccacagaccaaagaggcaacctccttattatctgccttgtgaccacagggccccac
tggctgttcagattcagacatgtgctgagcccaaaccttgttgtttatctaagacgcttc
tgctctttctcctcttgtaaaatacaaagtaaaaatagttccaggaagctgtgtggttaa
gacattccagtctctgagctcctagataaaggctgttattgttaggaaggtggtcattaa
tccaacctgccttttctgtatgctttggtttcacacccttctaaaggtactgattctttg
tcctcagtttcccttaagcctgtcactagccggtaactggaaaaaataataactttacag
cagttgatgtacgaatgatctaaaggtatcagttgatcacaagtttgctttatgctctgg
aattgtgactttaacttattctcaaagtgccttaccagatggcttatatcctcatctata
aaatggaagaaatgacacctacctcaccagattattgaagactgaaagaaaataaagtag
aaagacctcctggcacacagtaatggccaagaaaacgtcatagattggaatcacagtttg
gaatcccctcactttgttctgctatggccagactttgggctattgagtttgtcctaggca
ttatattttaaaagagtgatgttgacaaattatgacccagaagcaaatgaccagataagg
aatctggaaatcagactttataaggagcagctgaaaggagttgggaacatttagcctgca
gaagaaataactactaatgggagtagagtggggtagggcaaggccttagaagggtcttca
gataattgaagggctaacatgtggaaaaggattaggcctcaattctattccacacatatc
tatggaactcctattatgtgccaggaactgggaatgcaaataaatgtaaagtacaatccg
tgtctttaaggatctcagtctacaagggaccatgacaatgcaaaaaaggctattacagag
gactttgcaatgtcctctgtaatatggagaaggcagaggagggttcattgagcccagaga
tactggggaagacttcaccaagaaggtgacatttgagtggaccttaaaggaaaactagga
cttttttaggcagagaaggaggggaaggacacataggcagcaagtacagcatgaacaaag
acaaaaaggcatcctcatggaaaacctaggatgcatcggaaaagaagagggaagtgagcc
tgcaatatttgactggagccagattgtcaagggccttgattattagctaaagagcttgga
ctatttaccttgagtgggtattgaactatttaccttgagtgggtattgaagagccatcaa
aggcctttaagcagatttttattttaaaaggaaatctctagcacagcttgctgaaagagc
tacactgaagagagataggaggcagggaagacaaggcctcTCAGCATACCAAAGAGAGTC
CA
Primer
(+)CACCAGGGCACAGCATAATGTA
(+)TGGACTCTCTTTGGTATGCTGA


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