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Mouse element [ mm1671 ]


Position: chr6:34,666,215-34,668,175 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cald1(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAACCGTGTGCAGAAGACAGtgtgagtcagaagttacacttcttccctgaaggctacagc
cataagaaaaataccagcagcggataggttgctaagttcactgtgctctgccttctccac
ctgtggaaaggctagcggaagctaagggaactagtccccacagcaacgaatcccggtgga
agcttcaatcagtataccacacccctgcttttgattctgagcatcccatttttcagaaac
cccagagcccccgaggctggggcaaatgcggtggaattgagtctgtgattgacctgcatt
cattatcatatcccacttttcagaaagtcaagagttctttgtctctggttgtacttgctt
tgtttagttcccactaggaagcaggtcccacacaactgtcttcaggacaagtccagtctt
caaggacatttgctaaacactgaggcaaaaaaaaaaaaaaaaatagacttcctcattttt
cttatttgtcctaaatgaggaacaccaggaaggaaagaatgtggtaggatgtaagatgtg
tttgtcaaccagggccgccagttcttaagtactcttgacagatgagcaacatgtatgtta
agaatcccgagacttgaccatcctgaaaatcttgggttccagtttatctgtttattaaca
gtgtgctcagagagaggtacttaatgtctgtgagtttcttactacattcatctacaaaaa
aaaagagagagagaaaaatgactgtagttaacacaacttctgatgtttagtgagagttca
caaggcaggaggggtgggtggttaactgtgagagccatttgagggagttagtacatagaa
ggtgagtgggttgctaggtaatcacaagagcagggccaagtctgatggggtgaattcgtt
tcctggaacttccagggcaaagtagaaaggcaaatgggtggcttagaaagacagaagttt
gttagaagtctgaaagtaacatcagtggggactcactctaggagaccactgggaagggtc
tgtcctggcctcttctagcttctgatggccctagatgtcccttggctcatggccttgtgt
ctcagtagtttcacatgccattctggatgtctctttccattgccctccccccatgcatgt
ctgtgtttgtgttcagaggacaccagttgtactggattgcataccactcagatgacctca
tctccacgtccttacatctgcaaagacctcccattgaagtcacggagaggcttagggtta
ggagatcaacagagctctgtggggaatgcaattcagctcatttgtaagtgagcagatctc
ctagaattacatgacactcaacaggcccagccagacctttaaagtttgctaatgtcccca
caaaatgggcaaacatcttgcatcccagagggggctattagctagtctcttgagtatttc
ctaaccacaaaagttccctagtcctaagaacaggaaggggcttttctcctgaaatgaagg
acacccagaaagaatttgttaactctgttaacttcaaggcaaagagttgtacagtcccag
ataaagcttaggtctgcaaagttcacgctctctgctctggccctgcatacttcttaaatg
tccgaccttacttaaatatgcgctttgatctctcctgggtctcaagactggtgagttaaa
gagagaccatgtaaaagcccctaccccaaagagcggagatatctctgttaaccaacttct
cccaggaggcctgggatgctaaggagtatgagccccactcagagctacagtgaaaactcc
caatatcctcaggcttaggaagactacaggaacacagcaaaggtgaaagtgagcatatga
aaagagaaatttagaagagaggacattttaagaagtcagctagactgagtgccaatacaa
tgtaaccaaccttccaactgaACATGCTACAACTGCTCCTT
Primer
(+)CAACCGTGTGCAGAAGACAG
(+)AAGGAGCAGTTGTAGCATGT


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