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Mouse element [ mm1669 ]


Position: chr8:97,882,574-97,885,718 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mmp15(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGTGACCCAGAATGCACCTtgctagtaagaggtcaagccctgtctcttacagggtctcg
atcccagactcagcacctgtttcttctggtgtggctgtggcagacggagcagaaccctgg
tttgtttccaagaatcctcaggtcttagaaggtctggggctgattcatctttgatggtcc
tgacaagcttccctttgtacctgcctgagcaaaaaacgcctggggcttctcagattacag
aaggagttgaggtcagagacagagcagaacccttgagattgtctttatcacctgaggcct
gataagagctttggggggaggggaagggctgatgtgctattactggacactgccctagtg
taagccccaggagcaggatattgtccacagcagtggctcaggccccagtcctagctcccc
tctccaatagctgttctaggcacagcatcgatctgagatctgggggctccttctcagatg
caccctccctgcgggcttatgtccctccatattgcttcaacaggcctggggaaggacagc
ctggctcagtgcccagacccagccagagacgctgggtgtagagaggattaggtgccctgc
cccagtgctgtgctgtgctgtggtattcctgagaagggccagagcccagcatatgaggcc
aagggaccaggaacactgcagaaacctcctgcacccagatcagctgtgtgactctgagca
gccagctcactgcctctgaaccttgctcccagaacaatgagaatacatagatgtttgtct
ttcaggaggggttgtgagcattgaatggtccacagcaggttctgaggtgttgtgtttact
gtcttctgaggaccaggaatttcccttatgaagtgctgtcctttgccttcctgcttgagg
tcagccactttcctacaacatcaatagataattttcggatggaggctgaaattcaaaaca
gcagctagcatagccatgactctagggtcttgggaataccctacagacacactctgatct
aaagatgggagaggcctcatagcccagtcctcttccgtcatcggacagtggccctcatag
aaagggcaacaaaccctgcgttagggcccttcctttactatgctcagtactttactcagt
actaacttccgtgcctcagtttccccatcagagaagcacagctttgcctgcttgcctcac
ccatgaacctgtaggtgacaaagaggagtaggaggcgccatgcacaagggacagatacca
tcaataggaactggaagggcctggctacagccctctttcaccgggggggaccttgggtac
tgttcccatcatttgtcccaaagcagcagagccccttagttatctggggctcaggggcct
gagctgcctgtcactataaggcagtggtggccaacctgtgtaccctgcttcccaccggtg
tggctagcctccaaatcctctcatagccaggactgtgctagaatgatggagcattcaccc
cccccccccagcactaggaaggggagaagccccatggtgctgtctgctgcccagtgggca
gcttcgtggacacttggtgtgcagccaccctgagcacgtgtttgccagaggcaggccagc
catcagcttcacctcataccaggaggctgtggctctgttcaccagtccctgtcccagggg
tgtcaccagccactttcaccccagcagtgcctgggaggcacgactgatagggagatggaa
actctgtgcttcctggggacttaaaggcatttaactatgtgaaggagagccaccaggctc
ccttgggacctgtctggcagccctgggctggctccgggatgaaacagctcttctgccaga
tctctgcagatctctgaagctctttgctgcaaacaggccagctccccttccctccctgcc
cagggcttcctcctgagcctctatcccagccttccttcccctcttatggctctgcagata
ggctaatcagcccctctgtggttctgattgcttgcgctggagatatttttaccttatgca
aataggtgatatgaaagtgccctcatctgtcagcagccaccccatcccccccaacctccc
tcccccctccacacacacacacacacacacacacacacacacaccagctccatgcctttt
gccatttgcctggtggccttgcccattggacttttcccacaaggcttcaggaaaactgtc
caaaagagaagtggactctgcataggagcttggtaggaggtttcagtgcttgggaagacc
tgaggtactgttgcagtcgttattaccgtgtgggtcagaggggtagagagagtcagaggg
aaagctgtgggggctccctcctcccccagctatcctgtgccctagccttgctcctgcctg
gccagtctcagcagaagcctaggcccccttaggcctgctggcagaaacaaggctgccagt
cagagccccagtctcttatcatccacaacatttacagggcttttggccacttgatccttg
cagaacctcacagaaaaagcaggccctaatccagaccgcgtccccacccccacctttaat
aagcttggccccactgtgtacagagctgacacttgattcttagctccaggtctctgcttg
ctgctctgccatcctccaaagcccccgggtctctgagtgggactgcacggccagccaggc
tgggactcggttcggcagctctctctccatcgatgttttggcactgctgccctgggctga
gcgggctaacatctgggtgtcagcccaaagcatcttccatgtctagcttgccttgggttt
cctcagcgaatagccttccccttctagaacgacctagaaagcgggtcttccaagtggcca
agtaaatgcggtgaggccaaggaaggcctctgtttccttgcttctacctgggtaccatcc
tctcaccatcctgagggcctgaggcagttggtctttctgagcatttctcagaatcattca
tcagaattgctacttcaggttgctggtgcgttcgtggacctaagagctgtgaagcacccc
ctttctggtgcagagtctcctgggtgcctataagctctagatggccatgtctcccacagc
cccccAGGGGGCATGCTAGAGTGTA
Primer
(+)cagtgacccagaatgcacct
(+)tacactctagcatgccccct


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