Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1662 ]


Position: chr12:29,779,755-29,782,459 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Tssc1 - Myt1l

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGTTGCAGCTGCTCTACAAaggccaactggtggttttgaagtcttccgggtatagtatc
ctagccagaagctcatgggtatgttctgactcctggcagacaggctctctggtctttgtc
ttggagagggataatatggaccttctgctagtctgagaggcaactacaggaccttgggat
taaagctgattcctcctaaaaggctcaggaatgggccttcctagaagcctgggggtgcgg
gggacattccattgctacccactaggtaatgtttccctggaaaacatggcatacctgggc
aaggtctgtagaagaagatctcccctacgtgactaatggatgcactgcaggcatgcaagg
aggggctttgggacttgaactgtcctctataagcagaatgacctgaaacaggtcacacac
ttcaggcttcatgaagaataaattacaagcattgtgaaagacaaagcagtaaggtggctg
ccatcactctctgctacgggggctcctgcacagattcttctctgccaggctacccctcca
gcacagttttgaatcccattttctttttccctaaatcctccaggatagatagctgctggc
tgtgctggcttcttggggcataatcagcctctggtcacctccctgctgggcctgctatta
ccccttgagtgagctgaggctgtgatcttaccattcagcaagaggcagccactccataca
gcagagcctcctcttgaggcatcctccttccatagtggggcaccaacagctctggggact
gtgccctcttgtttgatttgtttcaactctccccatgccctcctctccctgcagaggttc
tctgagggaccctgaaaggtgtttgtgtgtgaagacttctaggatggcttctgactcctg
gggatgttttaggtctgaggctgataccctagtctcagattccaagtgcctaagactgtt
tacagaagcctccaggccctccccacaaaggtagccaagttggttcattaattctgaaaa
caccagtcagagcgctttccttgtgccactggtgcaaatatattcaaatgatcattcaaa
tgatttaacaggcaaagggtcagccttcccagagtaaatcccatttctaatgtgcccatc
tgagtgatttcattagggtgcaatgttaaagagaagtgtataccgctgcataacttatac
aaatgtatgcaaatgaagtgcttgaaagagccctggtggaattccttggagattccccag
cattccactgctgcccgcggatcagctgttatcatcacaaagagcagcagctcccagcag
ggacaggagggttagagaggctaagatgtggggaggggagagcaacagcgacacccagga
agcccttccagttctggagagcggtgcctgccccgggctggctgttcaatcaacctcccc
cacagagctggatttgcagcagtctgcctggtgctcagaatacaaatcagctctaaactt
ttgaacccttttggtaggaagaggaaaaaaaatcttcatgaggagaagccagatgcagat
ccagtctcgggacgagttaaatttattttcaaggaatgaggtggggagaagagccaggca
gggccaccagagcttctatttggaccttcttgggggctgcccccggccctggactaattg
gtcttagattgagagctggataatcagcacggtggcatcgtgcctgtcacctttccgagg
aaaaccccgaggtcaagcatacatgtctataaggatgtatttattttgcagtgttggggg
atgaacccagagcctttcatatgctcagcagacgctgtgctaatattggtagatattggg
gtttaaagggtacctgccaggatctgcaggcatttgtgctctgcgacagggaattggaca
gagtcatatggatggtggcaagcaaagccacagtaggatttattgcagaagaatacactt
ccaagggaggaggtgggagggagcaagggtgaaagtttcgaggctcgaaaggtgcccatg
cagaaaagattgggacatttgtagaatgtgctctttcatctgtgagttctctatgttaca
agtccagggtgtatgtcgaggggcattccagtctttatatctgccagtgagtttgggttt
tttttggggggggggagatatgataattttgtaggctttgtacgaagacttccaggctcc
actctcctgcctattgtcactgagctgcattctcagctgcccttgttagggttttcattg
ctacaacaaaacaccatgaccaaaaagcaaactggggaagaaagggtttatttggcttac
attttcataggttcatcaccaaaggaagtcaggataggaactcaaacagggcaggatcct
ggaggcaggagctgatgcagaggccatggaggggtgctatttattggctctcttcccccc
acccctcccccccccaagatttcttatagaacccaggaccattattagcccagggatggt
accacccaccgtgggctgggcccttccacattggttactaattgagaaagtgtcttatat
ctggacctcatggaagcatttcttcaactgaggcttcttctctgatgacactaactgtgt
caagttgacacacattaaaaacaaccagcataccagcctttggtgAGTTTAGGTCTGGTG
CAGCC
Primer
(+)tggttgcagctgctctacaa
(+)ggctgcaccagacctaaact


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.