Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs166 ]


Position: chr16:54,249,594-54,251,153 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FTO-IT1 - IRX3

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGTTTATCAAACCAGGCTTCTGggagctcccactccctggcctggctcatgtaaccagag
aatttgatcttccattaaaataaatttctgctcctcatctggtctcctacatgagcgccc
cctcctgcagcttgaaaaatatccctccccactctgtgcttttttgagccaatctttgta
tttcttcaatttttatagctgaccattttgtacgtgaactaagtactaaacaagcattat
tatcgctttgtgcacagtgcaccagaggcataaatcccacattaacctcatcctaaagag
cggctgaatgcattttaataaatgtcccaaatggtttcaatgtctagtagccaaacgaaa
taaaaaatgcacacacattataggatgttatgaacctttctatcaaaagtaataataaac
agactgcttgttgggctgggcgattgggttacatttttaaacagtatattgagagacaaa
tcaaagtagagctgagatgattatgtgatatgatccagggaggcccagcaatttccaggg
gtttgctgtgagcaggtagacatctctcttgcctcttgatacgatttcattctaagccct
cattctacatggtgccgagagaaacgagcaaattaagaaatctttgctgcactcagatat
ttaatataagcagccagataaaggcagagatgcacgtcatttgtcagctgaataaaaatt
cagatgaggtattttcctgacgctgtgccaggcaccattaggaaagcattttattttcat
gtgttagtgacggcatgctgctgaggccaaacttcatcagcctacaaggtgttacttgaa
gtcaagcacagcatggcctcctattttggacagcacgtccggaagactgccaccggcatg
gcttttcctcccctagatgggatttccactctgagagtttcagaagttaattagccattt
cagttatcaacccggagtagataaaaaataaaaaataaaaataaaaaaaataccatgcca
gtggcctttttggatgtgcagatgttttggtttgggcacatctgtaggcaatcactctgt
gttctgggcaggcacggtgttttattatgggattatatgtgtaatcttggataaatagta
gaaattggagttcagttggaagacttgttttctctcccagagagcagtgtaaatagcaaa
ccagaaaccatttgctcattattgaagcaataatctaacttgccagccttttcccttatg
gctggacatccgaggtcagtgtaaaactcttggcaagtgagaggctgtggggtgtcaagc
caggaacaggggccaatgactggggcttctgctgggttctagcaacagccgttgacgcag
ttgcccaccctgccacccctcattgtggtggaagcggttgctggtatttggtacctggcc
accagggaatccggactgtgactcagtacctctttgcattggtggagggcagctgtctcc
ccaggcccggccaaatgtcttccccaccaagtgtgaggAATGCTGAAAAGTGGAGGTAGC
Primer
(+)GGTTTATCAAACCAGGCTTCTG
(+)GCTACCTCCACTTTTCAGCATT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.