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Mouse element [ mm1659 ]


Position: chr12:12,362,332-12,364,288 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4921511I17Rik(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGGGAAGCAATAAGGGACAtatgaagtgattcaaattttcggaaacatcagtcctgata
tttacccagtgtttgtgagatatactgggcgagacaggagaaattgggtgtttccccgtg
gtatcctgagtcagcttctgatcacgccggacacctcttctccttctggcccatctgtgt
ttcttcctacctccaggaccttggctgccctgttctctccctgtagatgtacctcctcta
tctctcacctgtgccaccattctagacacctgccttctccagttccttcccaactgcatt
catcatttcctaacttgcctgaacctcgtacctcctcataagtgacgttgtttcgtttcg
agaaaacatttttcccagtgtccagaaatcctgtgagagtttataattttctgtgttatt
ttcaggtgttactgctctttttcatatgtcagcttcacacatgcacataatacccacagt
gtattatggtcataacacccccattatccttccttattcctttcccactgccattaaccc
ctttagttctttccaagtagccccctcttagtatatgggttttcttttctttttgttgat
ttccatggaaaccaccagttactctgtctttggtagttgaatagactaggccgagactca
agtcgctgcgggtgtcatccctcatgggcttgactgcagctttcctgggcttatctggca
tctactccccccttgcgctcagtctgctcacacactcagccagggctcgctttaccatca
gccgccttataaagctattcctgccaccccagggtcccgctagtgactacgacatctcac
atgtttggagtatctgcctttgtattgtagaaagattaaataaaatggaggttcggtcag
aggagtgtcaggcttcatacaactttgtccttgtcactctgtcagtgaaatctgctgaca
acatcctgtgtctcaggatttaaataccaggaaacagttccatgacctgatgtctctccc
tctctccctgagcagtgacatcattttacagaaactggcctgatcgcaattctgagggca
gtgaaaggcatgtttcttcactgttggcctcctgccacagcctccttgaaatgcttctgg
gagttagaacctgcaagagctccagagatgccagagagtgagaactggctgcagagctta
gacagcactgtgtggctatcagagagctgcctttgcttatgtgaacctaaacacatcaca
cacacttctgtgggtaacactgtcaagaccaaagataagcagaacaggccttttgacagc
actctttaagtgtctttgctgaggaactcctgtgcacacctcctgtgtactcctgtggac
cactgtcttctttcagactatcctctcccactctcatggattttcttttctgagagtatt
cccttgaaccgatgagtacacacttgccaggtcttgtatgggatgtataaatagattggg
atgtcttggtgagttctggaatgatatgctgctgtcatgccgtcaaggattaatgaccca
agatgaagatgatgatgtggtgatggtgatgaaattcatctattcgggagagggtgtgcc
atgacatacatgtggaggtcagaggaggtcaggcgttggctctcctcctccactctgcgc
ttcctggcaattaaattcaggtcattaggcttggcagcaagtgcctttaccttctgagtc
atcacaccctttccaaattatgtaagctttaaggttgatttgtatataaaaatatgtaga
taaatatataaaaataatatatgtaacaaaaatgtatatatatatacagaatataaatgt
gtataagtataaaaatagataaatatataaaataaaataatatgaataaaaggggttcct
ttttaaaaaaatttatACTCAAGTCTGCAGGTTTTCA
Primer
(+)TGGGGAAGCAATAAGGGACA
(+)TGAAAACCTGCAGACTTGAGT


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