Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1657 ]


Position: chr1:167,034,424-167,036,436 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4930568G15Rik - Tbx19

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCTAGGCCAAGCATGTTCAaaccaccacaggcctcgacttacacacaaacaagcatgca
tatatacagatgtgcccacacatacaagcatgtatatatacagatatacaacatacatgc
acacacaagaatggaaagaaaacacacagcatgtaccggtcagcctgtacacactcagct
tgcctccatctttgatttgtttatttgttgatttctttattgctttgaaaaagaatacat
gcctttcctcctggcaatgcacagaacacctcctttatctacagcaccctcttaaactct
gccaagaacaccaccaggttctgattaccacaagcagctatgagtgtggcccaaaacaaa
atcataaactgacttgaaccattatgagattatttttaaaacatttttgtaacgtgactg
catgggtctccatggtgaactttataggtgacaacatcacatcacagtgattggacacac
ttgaaggcagctgagctctgagcatttccacccactcatagaacactggctgaatgttct
attcccggaactcctccaggctgggcctaccttttgttttttctgactcactttccagca
gctactcagcaaacatagccctgggtaccatgccagccaggcagctctacagcctgcctg
ttagtgtctggcggtaccattgctgctctgaggttccatctcattcatgcccacacaaaa
gaaattggcccgcatgcctcctgccttatcagtagccaccagacatgtccagagccttgt
aaactgcaggtggctataaatggaattcttgccgcacacaacccttacagagcagaacca
cgagcagtcagccggagctaaggggtaccccacacaagcagtgaagaccctgccagccca
gcctcttcctggagagtgaactctgagtgaacgcacctggggattgatgcatccaatcag
gagccagtggcagctgcccactctgctgtaacatagcctaaccttgatgaaagaaaaaaa
tgtctctttggggtcttgctaaattatccgactccagagcagggggacaggggggggagg
tttgggggcaaatgccatctgctaggagactacccacccccaccccgccccaagcctctg
attccaaggtagtcctgacacaggaactttagcctggactcatgccagatagagatgagc
taaaaaccatgtccaacatgactgcaggatatagaacccaaagccaattactaaacaacc
cccctggggggtgggggggacaaatttctgaaaacagtgatacctgctgtttcctattga
ggatccattaataaaataataaaaataaaatctcactaaatgagcatatttagagcagta
ttcccttcgacgggttgtaatttctataactctctctggagacagcctttagctctgtat
agcaactaccaggcaggatgcaatctgcagtctgccggttgcagaggagatgagtcagcc
tgcagcagaaagagtagcaaggacatcttccctatgagcaccactgtaactcagcagcag
tgcagcatagaagctgtgtttctgcaagataagcttcccacccaaagaacatatcgtttc
tctctgcttcagaaggaagaggacctcggaggcttctgaaccatgagagaagtagccagg
cttcgaggcaaatgtcctcctgaagagcaagacagacgaacaccaactcctccccaagct
aggtttccaaactgcaaaaccctatttataccctctagctcttcgatgcagtgggcccct
ggtgtcttcaatgttctctgctgtaaactgacttctcagaacttcctgatgtgcctttac
aggcatgcaagcccccctactgtgaaccaagaatgagtccccctgctgagccctggtcca
gtgttcaggaatttaaactgtgagtcaagccagacttctgacaagcacaagcgaaaagac
ttgcagatgagaaGGCTGAACACTGGTCCATCA
Primer
(+)ccctaggccaagcatgttca
(+)tgatggaccagtgttcagcc


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.