Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1655 ]


Position: chr13:29,718,977-29,720,806 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cdkal1(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATCTGTGGGGTGGATTGCTagagcctggatttagcagaagtgaggatctgggttccagt
acaaaaaaaaaaaaccaaaaccaaaacaaaacaaaacaaaacaaaacaaacacaaacacc
caaaacaacaggagtcatcctagcttcgtacaaatgaagacagaagtgctcatcccacag
gagctaagacaatgcagcgtgtagtcagcaacacctattctccagcataaataaggtctt
tggtttaaaatctctgcatctccctcagtcagtctgagagcatggagccaggcttcctgt
ccgcactggcctctgcctgtgtctgcatgcccactgtcactcatctgttctgtgtctcat
cttcttgctgtgtcacctcatgatgacttgttctgtttcaaattctggaactcaattccc
agtactatgctgggatccctgggaggccagtgtgcttgctgactcttcctcaagtgttct
catggacctgggattcccctctactggcattcactgaagtcagcactgttctaggcaagc
tgccagggcaggctctaatgctccttcagggaccctgctctggttattgtcccatccaga
tgaagggcaatgacaaggtctgggacaatcttgatagaagccactgacacttctgactgg
ggttgcttcttaaaagatcccacaccaaaggaaagggtgtggaaagaaaagtgggcagaa
ggaaagtggaagaagcatttaaacaaaacacatgaggactgataaggctacatactgtgt
agaaaagctttctatacttggtaaattttacattggagtcacgtggtgtttgtgcactgt
catgtgacacgtatcaccagctctgtggagcgcgagtactctctgtccaactctgtggag
catgagtacaccatgcccaactctgccgagcgtgagtatcttatgtccaactctgtgaaa
cacacgtattgaggacatattaatttaaaagcaggtgtggaaatcaagcaacagttctct
actgtcgtattcaataacagaagtgaagccactccatgaaaaaccgcttgtgaaaacaca
ttaaaaaggaaaaatgagtgatattctaaaacattcctaatagaaaagccagaaaatata
aataatacattaggaattcaaaatattcttcactcaactgctcttccacacattgttgat
gagatacttttaattctagatttccattgaataagatagactaatccttatctgtcaaaa
aaaaaaaaacccttgctattgttagtaaccttagacgcaacaattctaaagtgcatactt
ctgtgaacatgtcacaacacgaccaactcgagcagtaagtctatgtctaacttctaatag
gaggggcttcttagaatacagaagaaagtcacagtgccaaagcactgaaggggctttttg
atgtttcagtcaccaggaactgtgctgaccaatcgcttcaacactttaaaataagggaat
tcatagtagacactttcaattgtccataagtaattaagtaactgtccaagaggaagacag
agccaggttctttaacagtcagaatacaaaagatctttgagggctccccactgaaagcca
aaacaaaagcgaggtggctgctcaactgcacagatgcaggaaaccctccacctaccctgg
ctgtggtgacacaagagaaagcgcagcgcacctacacatcttgtgagctggccattggcc
aagaaacactaaccagctcaggagcagggagattagactgaactcaggagtccgccccaa
ggtctgctagAGCACATTTAGGACAGCGCT
Primer
(+)CATCTGTGGGGTGGATTGCT
(+)AGCGCTGTCCTAAATGTGCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.