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Mouse element [ mm1652 ]


Position: chr9:119,935,724-119,937,434 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Xirp1 - Cx3cr1

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTTGGACGACTGTTCTGGCTtgccttctgttgctgtgataaacaccacagcctatcactg
agggaactgggcaggaactcaggcagggctggtaagctagttccctggcccaggcccact
tgtcttgcttgggatggcgctacccacagtgggctagagctcccctacactaattagcta
tcaaaaatgtcccatggatatgcccatggatcaatctgattgtgacctgaaatttgtgat
cctccttcttcaaactcttgaatgctagacacttaccaacacagttgggtaactcagtgc
tgggaatggaactcggagatttgtccgtggcaggcatgtactgtaccaactgagctgtgc
tccagctcttctaggggggtagaagaaagagccaacacgtcagtccagcacccaatgggt
ccaggagatcgaaaggcaggcagaaactgaacatgggtgtacagggttgcctttgtatct
gacaagaattagacacggccagctgcaggaacatgcttgcaatcatgcatatgcggtgaa
ctggtctcaaagcagcaacaaagcattcctggtgatgagccacagggcggtacagtgagg
caccatgaactcgcttcatttgctcttccatctcagagttcatctttgaaggtcatcagg
gcagggactctagcttgtgtcaagttgacatgaactctaaccagcacacagacccaaaag
aaaaagactgtatgacgctgttgaggagagggaaaatcaaggccccctttattagcctgg
cttggggaacgaacaggcaggacagcagcggtggggaacaatggctttcaacaggagatg
gcaggtctccaggaggagcctgtgagtcacactcagagctggaagtcagagagaggactg
agctggtgtcccctgcccgcgggagaatctgaggggtggtgatctccagcctggcccatg
aagagagagggctcagtgctggacttgggaggaggaagactagagatatggctggggaga
ggttgtagtcagagggtagctggaagccatgcagagacaagaagctattttgggaagaag
gagtggtgcagtgtgggtaagaccggctgccaggagccacagcaggtcctgagggatccc
ggcaggcagagcaagaggtgaagcatgccaaggcaggctggggcttcaggaggggacagt
ctgagccatgagaacagacacaagggagactgaaacggaaattaacacaggggctaggat
tgttgtcagacagacggacagacggacagacagacagaccatcaggaaagagtcatataa
agtgcgagtggctaggctatgctaggagagggactcatggttgcagagagagaaaatgca
atttgaaatggtggcataatcctcagttaccagaagggggcagtatgtcaccatcctgca
ggacgactgtgtggaagccaccttagtctttgtttttcaggcgcgcgcgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtag
ccctggctgttctggaactagttccgtagaccaggctagccttgaacataaagatccact
tgcctctgcttcctgagcactggaaatgaaggtgtgcacctccaagcctggcaaagggtt
tcttttttatcTCCTTCGTTCGTTCGTTCGT
Primer
(+)cttggacgactgttctggct
(+)acgaacgaacgaacgaagga


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.