Human element [ hs1647 ]Position: chr14:32,940,050-32,944,094 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AKAP6(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CtaCAAGAGCAGTAACAGCCATTTGatttttggttaatgttgaattagttcataagttta acaaatgaatgtcattcacaaatttagttaattttcctaagacctttaatccatctaata atctcaaatactttagatacatgaggatagacttagaaacctaactaggccaaatctttc agtgaacttaggccagttttgaaaatgtaataaaccaaatttataactatgataaactag gttctttcatattacaaaattaatcaaattcttacctttattaaaatcatggccgatatc cattcaacatttcaaattaaaacttcaaggcagttttgtattttggattctttaaaaacg tttcaataattttaaataataaacaccaagattgtctccataatcataaaatgtactgcc aaagttagcactaagtaccatgggttaggcttatgtcattatctctgtatttctacattt tcctagtgtttcatagtcacacagctaaagatagtagaagtcatctgatccatgaccagt tctgtaatgcgtttatggacggtggtagtaataagaaattgtggaccaaaagcaagatca tagtgctacttcctaaactgtgaattagcaggctgaaccttttaatagtttaagtctttc ttgtcagtgggggaatccaagtccatggcgagagctgagacttagtttcataggccattg tcttttctcctaagtgtattatacatttactcaattttcattgtaaaccctttcaacatt ctctcacccaatttgggtaggtggaatcctgtaccccccaccagggctatagctaatatc ttcattgcacagttattgttcattgagacatgtacctccatccatggtataaactgtttt tattatctgtctcacctccattttaacagtaattctgttgacattgcttctagactggag tttggctaataagacactggacactgtgttatctgtgctaaggaagcacagataacgcag cgtgttaagcattctgggtcaggatttttgtgctggcacaattgtgagtaaaccaagaaa aatagtccctatgagatttctttcagacttcagcacacagaaacctagtggattgttcct taagataaaagagaggtttgagaatttactttttgtcatagtttgggttcccaggaatcg gattctgaggctctgagatctacatgctggaggtttattggggtgagttcttgggaaaag cacctctgagaggtgagggaagtaaatcaaccagagagaggagttgaactgcagctgtga cagagatggcagtattcctacccagaactctaaagtggctccccttttcccccaggcttt atacctcctcccatttagcagacatgggatgtggaaagctcccagggaagggcatgacct tgggtgaggcagctgagggcaagtcccagggagggtctcagctgagagcaataagcagtc aacactgcttagcaggtggggtaaataagtgtcttgatcataaggtggggtaggaggagg gcaagtataaatgctgtccaccgcattcaatagaagtgttttctctattattactaaaga atggcttgacccagaaaagatcatggtctttagccacagaacttaattctaggagaggcg atattacagcagactgatccctgtaatgcaaatggcaatgcccctctttgctgagaggca ttgtggagaatgcatgaaaacatggcagtgatgttggcagggagatggcaacgaggttct ctgcaccaactgtctcctgcagctgggaaaagacacacagcctggctgccaactgttggg ctcattgtgctctggctgaatttagttccctcttatgtcagcttgcaattctatgttgaa gaaaatcggtctggtctgccaccatcaccatctcttagcaactaagagagattgaaacaa cagctgggtaatttgatattgggaacttaaaggtcgtgaaaatagaatataatggctgtt tgtattaaaggaaaaaaaaagagaaaatgatgtaatcctaatgcttagaaatgtttggaa tgccacatgggttacaaagagtgaaaatctagtttaaactggttggattctttctctctc agaatgattaaagttgagcccagaagctcacccaaacacacatatttgcctaaatataaa tccctgtggaatgttggagctataatgtgaaaaacagtttctgtgtttttgtattttctc taagactgacctacagctttcttatcacaagttttgaagcaatacttataacatagatga taatttagagttattttttactttgctttttgtgggcaatggggatggggactgcagtga agatgggagagaatgaggtgtggccctcagacatagtgctgtgcaggaagcctactactt cagaggctgcccacagcctcacatacaacaggtaataatagaattacatgtttgaaaact agaaaatgagaagtagaagccagatgaaattgttaaaacaagtttttcttttttccctag ggccagtgaggagaccatctgtttttcaaattagaaaagccagaaaatataatgtttgct ctcagaatgagtcaaatgtcatactctaatgaaaattccaaagcagaaagagagaaagga agaagagcttgaaatgccaaattagtggggtgaggtgcttgctgcttgcattcctgcaga tccaagcattttgcaactctagtaaacctgccaggacaaggttcatttgaaggggtgtgg attaccgggaggtgcggggggactgacattctagtgctttagatggtaggtaactgcctg gtcttgtttctcagaataacttgttcatccaccacatatgtggctttcatcccagcacat tgggcaggacaccactgttttcttcgtttggttaatagttacacttccttgacacctcat acagctgggtcatggatctgctgctgttctcaatgtgagcatcactgtctttttttcttt ttctttttctttttttgggacaggatctctgtcacccaggctggagtgcggtggcacgat ctcagctcactgcagcctccacctcctgggttcaagcgattctcctgcctcagcctctca agtagctgggattacaggcatgcaccaccgtgcctggctaatttttgtatttttggtaga aacggggtttcactatgttggccaggctggtctcaaactcctgatctcaggtgatccacc cgcctcggcctcccaaagtgctgggattacaggtgtgagccacggtgcccagcccactgt cttttttcatcaatgctaagagaatttaattctttccacatgaagcgattctacttcctc aacacgtgtttcgttttgtgacacaacaacttggaggaggtgaaattcattaacaaggaa taaatatcttctctttatggagccacttccttaacccctcaaatcttcctagaccacttc catccaacgtagaataagtgaaccatatgaaattgctgtttttgtgggtcaaaggcaatt gaatggtagtctcacatggttcaacatctgtatacaagcaagttctctgatgaaaaagct gagtgactgcgagtaccattcttagaattctttaggagagaagaaagatttcaaggtaaa caatctgacaaacttatttgtaatcaaactaaattccaggtggggctggcttatagttca cacacattaaagaaatagggattgaatcttgcaggaaactagcacttttccccaaggggg atgaggatttaagtttccttcatggaatatgtttccagttcatttggtcctgcatttatt ttagaaattgtttgatatttgcacttcactcattttccaaaatttgttctgattccagat ttctctgttaaatttctataaatttgtttatttgctatttgctttggagaataggaatta tatgaATTTCTTGGCAAAACGGATGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.