Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1640 ]


Position: chr3:57,274,043-57,275,619 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Wwtr1(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTGCAGCCCCTTGGACTAAAtccttgacagttcatttaagatgctttatgaagcatcttg
ttggacatagatcaaagaacacagtgagacaaacaatagaaggtgtcatggacggcacag
aaagatttgcgaggcaaagagacttgactagactttgcaaaaaaaacatgtgaagcctga
acacaggactccattaacttagtttactgatgaggaaacagggccagagagagttaagtg
gttttcccagagccctgtagctaacagcaggtggagccagtgtctaaatccaggcagttt
gacctctgaggctattccggtaatttccacagacagtaccagggagaaggcagtgaggac
tgaagttggcaggcctcaaattcaaaccctttcacctactactggagatgaaacttgggc
aagttacttcatttctctgatcctgttttcccagctataaaatggaaataccaaccccat
gacctcattcagcttgtttagaagagaacttaacgaaccagcctattcaacagcactgag
cacagtttttcctccccgagccgggaggaagatgggattggaaatgttttatgatccttt
tcgatgtatatgggtggagctagtatcccgggaattcacaccacatttagcaaagtttta
aggttcggttttaaaggccagtctcagaaagttctgaaaagctgcagccctccctcctcc
tgcccccaacatttcttcacatacaagctgggaatggaaaccctttgtaaaacagagtct
ttggagtgagttactggtaatctgttagctcccttaaacaacaaaaccaaacgtcattta
tggattcaaaaggcaccctcctagggctgagaagctgtgcggtggacgcagaggataatg
aaaggcagagacaatttgtgagttaagaagttctggaagcttcctcccctctagttcccc
cactggcctgcagctctgtggaataaatcaacagaagaagctagaaagtaaaaggcaatg
gagagcggggcctggctccgagtgagtgtttttggctcgcagggcacctcccaccagcca
gctcctgcctcggctggaatgtacttcaaagggagctaactgaatgataataacctcttc
tgagggtgctcagcttgatttaagtgtgtagccgggattctacaaaaatggaagaccgaa
ttgttttaattatgaagggtggggcgagtagaaacaaatgaaatgaaagcggtattttaa
aatcccaccgttaaagcggctatttcagtgcagaggtgcagctcactctttctttctcaa
agccacggagactgcagaggcagactgcctgggaagagggggggtggggggggatctggt
gtcaatctcttttgttgaaagcctgtaccaatcgattctagaaattcactgccacatttc
ctggagtgtctctttgaaacacctcgcacacactcagctgccagactggctctagaaaag
tgcagattcgaaactctgatactttggaggaaacatttgttgagtctgtaattattaTCC
AAAGCCTGTTATCGCCT
Primer
(+)ctgcagccccttggactaaa
(+)aggcgataacaggctttgga


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.