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Mouse element [ mm1638 ]


Position: chr6:53,573,765-53,575,077 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Creb5(intragenic)

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCACTGGGTCGCAGTAGGTAgcaaactctgtctcctgggaattttcttgaggaacaagtc
tggacagagccatgacttaatgactagagttgtctaaaaccaagttgttctaaattccag
ttcagcataaaacaagagtatgagtttgtagggaaagataagataaagggctgtgccacc
tcctcaggcaaagacagtttgtcacactgtcaccaggaatttcctcatgtgttttgttgc
aacagatcagtttcacacatttgttgtgaggaaatgtctctagctttctacagagcaatc
agttcattcattcattctgtaccccaaaagtctttgttgagcatttttaaagttccactt
tacacttggtccatagaaacacacaataaagactttgtgttcctaacggaagcctttagg
aattcacactctcataggggaatgaggtacacaaatggatgactaagtttgatgttaagt
gtgatttcccttagcccagtaactctttcagaagatttcacagctatatccaggccctgt
gctctacagtacagtagctaccagcagcatatggatatttaaattctaaattcactaaaa
tagattataatctaaaatacagtgctaaatcttagtgcctagattttagtatagataact
actacctgtggcccgtggctcccatggaatacaccacagataggaacaccatagaaacgt
ctgtgcatcagcgcttgctaatggaagcgaattctccctgatttgccagggagaatgtac
agctcttcgtcccaaagacgggaggagaaagaccactgacccaaatcatcatggccaaac
caactaaagcaagcaattcattaaagcaagctcttttattcacgtacactggctgcctcc
ccgctaaggcagggtttgagagtttagcattagacgtgagaaatacttcaagtgtaaaca
cgtgtggatatggaaggagcatttagacttgagaccaggttatgtatgctcttggctaaa
ctgttgttcctgatcagggtcttgaagatcgaatagaattcagaaggagaggcagaatta
aattctttaccttgctttttaaaaccttgaagttttactaagttggtgtagcactggaat
tcagcaaccgccctggaagctgagcctctcctactggcatattcatgaacgtctttctac
taaacctctctttgtgctacagggagcttatttggctctgctaacttacaaggaacagcc
tcccttctaaatggggttagtgtggattagttcAGGGAACCTGAGCCAGATCT
Primer
(+)tcactgggtcgcagtaggta
(+)agatctggctcaggttccct


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