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Human element [ hs1630 ]


Position: chr20:33,905,955-33,908,491 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: UQCC1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGAACCTGCCTAGCAGAGCtagtttatgtcatgtatcacaccattaagctttggagcagg
aagggccctcagagattacctagctcaatacccttgaggaaagggtgaactgaaacccag
aaagaagagacttattcaagatcacacatcaagttagtataagagccaggattagaacct
gatttctgggtaagtgcttttcctactttaccatctgcagggcatttccagagatcatca
acacattcatctgcaaacctcagttcttgctttccagcaaggcccacaaacatacaaaca
cattttctcctcttgggatacacctgcattctggttggctactgcccaggaaaaacggag
tgcaagagtagagttccttactagcaaggctccttgacttcctggtcctatattctaact
ccagtgacctgtaagctgcctctcccttcacctctagctgagacaatggcaaactgccac
agctagaaatgcttttcagatatcatcacccaggctggattagatcatgaaaaggggcct
tcctggaagagggtggaagtgagatcagtacagacacgtgatctgcaggcaacaggtgag
ggcaagtgacagcaccttcctcaactaccggactcactcggcagggcccttctagctagt
ccagcagccaaggggagcaggatattcgctctggtgaatccctgttggattttattccct
catttaagtttttggttgctggtgtgcaggttccccacctctccactgccagatcattct
atatggagcactctgcccatgactacacagctgcacccagcagaagagaaactcctccca
gatagtgttgggccgttctcttattaaactcatcctttccataatgctttgcttttcata
aaaacccatacatacaacaccacaaggaaaaggttccttttatatcagttactcatattt
tcccatttatttaagccattaaaattcatgcagatattttataagccaccaggattcagt
gactggtattactgaatgtttaataataaactaaacagaagaaatcagagggttaaatga
tgactgcaattcctgtaatgacttaattaaatttttattgagtacataaactatgatgtc
acctctagccaaccacaggcctgctttcccagcatgtcacagggagggagcactcaatag
gaggcttggctaaatgagcagcaggtctcagctgaaatggggaggggagtgaggctcatg
taacacactcaataaattatccgttcatttttaaacaaagtccatgagttataatatatt
tgccatgcactttttatgacataataaaaatgttaccttaaggattacttaacacatact
acaaatattatagcagaggcaggcacaaggggcaaagaaaacaaacacgagcaggccagg
gacgggtcctggagtttatgtcccaggggaaacagcatagtatattaaaaagggaatgca
aaaaaaaggaagggatgcaagagttcagggttactaatcggcagattaatgaatgagaca
accaacagagaacacaagtaaggcaataatgaatcttgcagggcacatgtttaattaaag
tagcattctcaaggaggaatattagctttaaagagatgccagttcatttgaggccaattc
gctgctctctttccccttttcactgttgctgccttaaagatatttatgtgactgcttaac
agaggaaccagactatgtggatacagggactgatgggagatcaagttttaactcctccat
ggactctacaaggcttctagtgatctgctcttggccatcttttttgcctcccctcctctt
gcctccccatcttacttcaccctgcagtcagtaaagtatgtgcacagatacatcatgctg
tcatctatttcttagtcatactgctgccaggaattcttctcttctttatccactgatgga
agggatgctaactccttatcctctaagacttagcacacatattttctctactaagtctgc
cctctcccccatctacaggtgccccaaagtgattcaagtctggagacgggtcccatcatt
cattatttaccaagtgccaataactgtgctacaactttacacattagcccacttaaacct
tcccaaggactctaagagacaggaactgttactgtctccactttagagaagaggaatctg
atgtttgggaaagttaaagctagacagctaggaaatagtggggtcaagataagaatacag
agcaatccaactccattgcctacctgtgttggaatagacactggaaggaatgtagctgcc
ccttcctgtgccccacagctcaggctatctgcagaggcagaactaagaaatgctaatgtg
gtcttgagtaaacacaactcagagattccagttccagtggcagctagagacagccaccag
atgggtcatcagtggccggttactaatacatcagatatccctagtagagccaagctcCAC
TCCTGGGAAAACCTGAG
Primer
(+)TGAACCTGCCTAGCAGAGC
(+)CTCAGGTTTTCCCAGGAGTG


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