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Human element [ hs1624 ]


Position: chr14:77,402,795-77,405,507 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LRRC74 - IRF2BPL

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCTGGCTTTCCTTTCATCAcctaagatgccatcagcggcctgctgtctggcctagtctt
ccccaacccatccccaggctggcccttcaaccccagctaagttctgagggccccaggttg
ggtcatagcctccatccctagaggatggaagcaggctcgaggccacctcctctgaggctc
cccagctgcctgcttcagtgaccccgcatggcttccctgtgggatgcagaccaaaggttc
tggatggggcccaacggtgctgggtaggctgtcaggattactgagctgtagtgctctgtt
gtgcagtcacttactcatcatatttattcttttttttttttcttctgaggcagagtctgg
ctctttcgcccagactgtagtgcaacagcacaatctcggctcactgcaacctccctcccg
ggttccagtgattcttgtacctcagcctcctgaatagcagggattacaggtatgtgccac
cacgcccagctaatttttgtatttttagtagagatggggttttgccatgttggccaggat
ggtcccaaactcctgacttcaagtgatccaccagccttgtcctcttaaagtgctgggatt
acaggcgtgagccaccgtgcccagcccacatctattctttcaacagctcttcgaggcagg
ggatatttatcccctcttcacagataaagaaacaaaagctcagagaggttagcacgagca
aggtcacacagccagcaaacggcagggctcagattctctaacaactccggcacaaggggt
ctcttccatcagcgctccccacctgacccccagtcctccctgccacctttcccagggccg
gtgcagggggctgagggtgccacgcccagctggctggagatgcagcagctctgcctgccc
ctgaaggacccaactgcgaatcagcagcctggtatccaggcaaccagtctccctggcttc
agataagcagaaacagctgggagctgctgaggctggaacaccatcagggaagggaggagg
agcccaccagccagtcagcgtgttattttaacacgttgttattcttaccctctcagacct
tggcttgactgggccctttcccccaagcttatccttgccactgccacaggggaggggtct
ccaggggttccacctagccctgagcctggcacaattgaggtgacgtaaggggagaaatgt
tggcagtccctctttccgtgagcaagggagaaaaggaaagttggccaaaggctgccaaga
ttaagaggctctggggtgacttcataagcagaagtagttgagtttcaccttttggagcct
ccaggcctcaatgagaggttttccacccccctataccaggctagctgagtacaggttcag
ctggataaccccatccaacacccatgatggcagcagcaactgggctgggggtgaaggaag
ccatggggacacgtggactgtcagacaagcgaggtctggctcagccccaactctgctgac
gacaagtttggccacgcctctctgagcctcagtttcctcatccataaaatggagacaatc
atgcataccctgctggctggaggtggaaagtaagtgaggaaggcctgtgaaatgccgggc
atcatgtctgacacagtgggtactaacatggttctcctcccctcctcatgttggggcctg
ccctgcctggcctggccacctctctcacacaggattctgaactctccagggctatttctg
tctcctgttctaaaggtcagtgactttcctgggatatggcagctgctgcctcttttccac
ctctaagtggcattaatcccatgccagggggacagtggttgccccagatggctttcccca
tcccctgcctttatccagaactggcccaggcatgtccaccctctcttctacacatagacc
cccaaggctaccgccaggcctggagcttggccatttttgactgactcatgaccagaatat
tccaccgttccttcagcactgggcccaccaaggctcttcattgactgccttggcctctct
ccctagcgccagctccaggtgatgcccggccctccctaagggctgatggacttttcccac
aaggaggcttggagaacaggacaggaagagaaagcgtgcccaccctgctggggagcctca
gaggcacactcccctcctctcctccagggactggcaggaggggattaccttgcctcaaag
tgtcccttatcccagaattactgcccactttcacccctgtgctggggggagcagggagag
ctgccagtgagtgacattcacctgtaacaagagcccagagcaggctgggtgcggtggctc
acgcctgtaatcccaacactttgggaggccgaggcgggcagatcacctgaggtcgggagt
ttgagaccaacctgaccaacatggagaaaccccgtctctactataaatacaaaaaattag
cagggcgtggtggcacatgcctgtaatcccagcactcgggaggctgaggtaggagaatcg
cttgaacccaggaggcggaggtttcagcgagctgagatcacaccattgcactccagcctg
ggcaacaagaggaaaaactgtctcaaaaaataaaaataaaaaaatttaaaaaaagaaaaa
aaaaaaagaaaaacaccaagagcccagagcagagcactctgcagcctgacagcaaCTAAA
GTAGGCTGGGGAG
Primer
(+)AGCTGGCTTTCCTTTCATCA
(+)CTCCCCAGCCTACTTTAG


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