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Mouse element [ mm1621 ]


Position: chr10:59,426,512-59,429,418 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ddit4 - Anapc16

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AACAGCTGGAGCAAACACCTgcaagccatggagttgttgacataagacaccttctctggg
cttggcctttgtgatatctgatcaggctcctcctcagccttcactctgcaggcctgagga
agaaaggcaggctgacatccctgggcgtttgtccccttttcaggacacactgaatcccag
aagtaacagtgtctctgtcattgtctctgccctttggggtccacctccgctctgcatccc
agccaagactctgatgtctgcctaaaagtggtgtgagtgtgtgtgggggggaggtggggt
gtcgttcccagctctatttatcctatctgtaacccacaaagggacaggctttggcatgga
cccccaccaagaaccacagttgaattttgatttgaaaagcagtctcaggctattgccctt
agtaggatgctcgcatagcaagcagaaagccctgggttcgaatctcagtattgcgtaaac
caggccaggtggcacatggcctataatctcagcaactggaaggtggcaaaggaggcagaa
agaaggttaagatcatcctttcctgcagaatgagtgctagagagtgagttttaggctagc
ctgagctactggaggcactgtctcaaaaagtttttaaaaaatacagagaagcacaaagac
ttataggctctgctttgcaaatttggaacacacacacacacaccacaaacacacccaatt
aaccgaaagtctggggtggctcatcaagggccaggcgttggcagggatggggtgggagta
atgctggttcactctccctcctcccacatctgagatgctctcggggagccaggctacgga
ggtgacagatgaagagcagctgacttaggagtgggggactccttccccgccgaccccctg
cagaggggaaagtggggacgtgactcagagaacgtgcctgggggcgggggggggggggtg
cggagaggggtgagaagggcggggcttggaggctccgcccaccgcctagctggctcactg
ctaagatgctgagatcagcactttggctgcggctggggggtgggggcgagccactacagc
ctgcacttttctggagagggtctggggaaggatggaagaggagggaaaggccaaagaggc
cctcacaaccccgaggctgtttgggtggggttgtgctaacaaagggggctctgtaggggt
agagggttggggggggccttgcatgcgcgaacagcctaaagggttgtgggggtggggtgg
agatttgtgtgagtcatcaccctaaaccctcacttagctccaataacctacgtcagaaag
gcaacctcaatgctctctgacctaggatttacttggcgaaggggtgagggtgggggatgg
ggtgcaaggcgggagctgggcctgcagtcgaccataaccttaccatcccaagtagtgcag
acagggacttcaaagttttcaggcgaccttgagaagagcagggcaggtcagctgggcaga
gccggcaagccaactctgtccccacctggtactgatggttacccaggctaagtgggtggg
tggctatttttgagctgacctacatacctatttgcctctctatctttttattatcgcacg
gctattaatgggagcttttctgtcggaatccatgggcccgtggtgtttgctgaagcctgc
acaatgaggcatgtgccgctctctcggtggctcagacggtttaagagtgactgggctggg
aagaggggcacctgaagaagcttccccaagctcttcctcaagcctgctgtaccagccccg
caggcagagaaccaggctcagattggacaagtggtgtcaccgctagtacctctgccagcc
taagtggtgggtctggttccttggcagggtgaccctatggttctgcagccctgaattgtg
gctttcctttatggactaggaagtgaggcccagagatgagttgtgggtaaaactggttta
ggatttactgctttctgtgtggacacgcaccccaacccggctgtgactctgtttatttta
ccattgttccggggcctcactagagcctccctctccaaaccttttaataactccttctgg
tcttgagagcgagtctagctcctcacctcagcctagcaaacctccagggcaaacccttgc
ttgtctggggcttcatcttccttccacagcctaggagggggcaagcacacatggttccaa
ttacctctgtaacgctcttaaattttccataaagtatagcgtgcatggctttgtgcacac
acgacttggcgcagtaatggagatgtggaggttcgaaatggatacagccgctaaggcaca
tcataaagggagcaccaagtgcaaggatttactttacagtgttttgtataggatctgaga
tggagatgggggtggcaacagcaggtctttgtcttcgttcatctgttgcctctccaggcc
ccttgaaatctttggtcccagagaagagtgtgcgtgggggagatggggggtgatctgcaa
gcattgttctctttcactgggtctataccccctctctcctgtatctgtgtatgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgataatgccacagtgcaccttgtg
gagatcagatggcaactcctagaagctgattctcctccctctacatttatctaaattctg
gggatcaaactcaagtctttgggtttggacagcaagcattttttttttacccactgcgcc
atcttgctggatcttcagttgggtttttggttcactggtgtaacagttgcctttgtcagg
atggtctgtgccttgtggagtggccctcattcctctgtgatcttagttcttttccagcct
gctcttcCTTCCCCACCAGTTACGGTC
Primer
(+)aacagctggagcaaacacct
(+)gaccgtaactggtggggaag


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