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Human element [ hs1619 ]


Position: chr17:57,934,217-57,936,802 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR21 - TUBD1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATGGTGGTCAGGAGAATCActagtatgtatactgcaaagtagagtttatagagcctacag
agccagtgaagagacatttcaacacttaagcctagcccagaccagagctctgagttcatt
gttctttctttctttcttggaccacattctttcctggaaaaaaggtgaatatgcacacag
gcaagataacaagcaataattaggaagctagaattgtagcactaaacatcccaaaaagct
tcttcagacaaggtagcattgatccctgtatccttaacatcttcctcagtgcctggcact
gaatagatgatactggttgaatggatgaattggctgataatagtgaattgttggcatact
tagtgagttctaagtgatgggtaaaatataggagaaagatgttgaaagatgttgtagatt
gaatagtaagggtggataggggaggggagttttcggggagatcccagggctggaagtggc
gaatgcatgggaaaaaacaggttctacagcttaagctcttgaggaaagattggggaggta
agagagaaagagcttgacaataagaaacagtatgcattcacactgtgctcattgtccaca
ggggtgcattctggctctgcaggataatgtttgacaacgtaatgtgccagttatcccata
atctaagaaattacactttcaaagttttctggatctgtatgcccaggagctaagggagcc
aatgttgtcctcctggctgactggccattatctccacacaaatcaaagcacatttccaat
gccactccatctgaagttttgacatcagcatcttggtgttaatttttaacttaaaatcac
aactttaagagcaaaaattttgttattccaagtagacaagaaaaaattattttccatgtg
aatgttttaacccaagctttaaaatatttaggcattggccaggtatggtggctcacgcct
gtaatctcagcactttgggaggccgaggcaggtagatagcctgagcccaggagtttgaaa
ccagcccaggcaacatgaggaaacttcgtctctaccaaaaatacaaaaattagctgggca
tggtggtgcacacctatagtcccagttattagtgagtctaaggtgggaggattgcttgag
cctgggaggttgaggctgcagtgagctgagatcatgctactgcactctagcctgggtgac
agagcgagacgctgtctcaaaaaaaaaaaaaatacatacacacacacacacacacatata
tatgtaataggtaaccatacatatcaaataatgcagttgtggatcataaaaaagggtcaa
atagcataagtaaatggacccagagctctgtctagttgggatttgcttctaatgttcacc
tgctaatgattccacgagttgccaaattagaaatatacttgcccctattggtacctcatg
aattttctcaaatatcaaatgatttcaacttacgactttctttcaagttaacttctagta
aggttcctcagaatcagattaacccctggtgagatactcagttacagatcttcatgaatg
ctggtttagtctgggaaattgtttcagtctgtggatctcttcaatgcttaaacaattact
ttaacttgtttggtaaaaattatgatctaattatttttcaagtgtacttggcttaacgaa
atgcagcagcggggtgtgccttttagcagcagaaccgaccactttttacattccttacaa
ataagatatggttcagtattttaaatcatagcaacagttgataagaaaaacagcaaaaag
gtaatcatttccatatggaaagaaaaagaagaaccagtgaagctgtgaactgtcattttt
ccatataaaagtcactattggtagatttggcagaaagggcaaatgttcctatttgttaat
cattttacatttgttaatatattgcatgtgatgtgttttatggaaatacaacattccctt
caaactcagttgtcaatttccaagcacgttttgtcttgggtgaaacccgtatcttgtgcg
tcaatttcatcaagtaactatatttccttggtgataattttctcaacttagtgaaaaatt
taggtgaaaattcttaccccttttactgaaaagcatataaccatcatctgtaccagctga
atacctataagtaatttcattctttttttttttttttggagacagtcttactctgtcacc
cgggctggaatgcagaggcacgataccagttcactgcagcctcgacctcccaggctcaag
tgatcctcccacccaaacctccaaagtagctcagaccacaagtgtatgccaccacaccca
gctaattaaaatttttttttttttttggagagatgggggtcttactgtatttctcaggct
ggtctcaaactcctggcctcaagtgatcctcccactttgccctcccaaagtgttgggatt
acaggtgtgagccaccatgcccagcccattataagtaattttaaagcaataattgaataa
aatcaatatctgctctggcattccaagatccaaaacaaaatttgagCCAATTTTCTCATG
CCCAAA
Primer
(+)ATGGTGGTCAGGAGAATCA
(+)TTTGGGCATGAGAAAATTGG


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