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Mouse element [ mm1618 ]


Position: chr1:164,115,642-164,118,955 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 2810442N19Rik - Dnm3os

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTCCTACCTGCCCCTACCTCtaactgatttcagttaaatatatctctctagggagtgtct
ggagacaatgtagaagagaataatagacttatacagacatagtgctattcatcattgttt
ataagtttatgtacacatacattcacatacatatatacacgtatgaacatatgtctacac
ctttcccactctggatactggatacttgccatgggacactacctttcctggcaagtttcc
ttttataaagcacccctcctcccgcctccgcctttctagttcttggcaaagaaactaaga
cagtacattatgacactaaagttaagctttaattaaattagtacctgctcagttagagtg
atactaaaaagtcaactcttattttcaaaatgcaattgggattactattctactattgat
gctttatgacagtaatcagccaggaatggttggaccattggcaatcaagccttataaacc
ttccttaaacaaaaacgaaacattgggcattcaaagtcctctacattgtttccctgggtt
ggaaatgtgggtcagttggtgagtgcttgcctggtgtccataaagttctgcatctgaacc
ttagcagtacgtgagccagatagggagggcagcacatgccttgattccagcattacagtg
gtaaacgcaggaggatcagagctttaaggtgatccttgactgcgtgggaagttcaaagcc
agcctgtgatacatgaaacaaggaccagaggcatgattcacacttcacaaatcaaatctt
agaactccagcctaaggaggcacagaattttaattcctaggggaagttgtggtgacctca
catgcagagagggatacagacacccatgctccacttaggaagacgctttagcaggcctat
tgtcatttaatttcctatttatttttgttctcatgtacatgtatggcaagtgaaaagcaa
gtctttatggtgacccataacctacagatttttataaccagtgagagacatcaaaagttc
attccatgcacacaaagcctgtatcatttttatgctttatctactaaactatgcttctta
aagagaaatttcctctcttcatctacctcccttgactagctgggaactacattaaaagct
tctttaaatcttttaccgtttgtcttaacctctgactagctcgcactgcttgccttaaag
atctttcccacattatacaggttaacattgcctgattcttgtggtaaaaggctgtagtct
gtaacaaccccaaaaaactcaagaaagaagcacttatgcctgcaagcatgaaatgtgggg
cctccacttggaatgacagctaccaagaacagccacaaggcagcctgattcatcagtacc
ctgagttaattaagaaacaaaggcaccaggaacacacacacactcatgactggcctggct
ttgcttattcggtttcagtcagagaccacaacttctttcaaataaccccagtttattttt
gaggggggaaaaaaaatcctgtcctcagacaggatatggaggcggagttaaggggtgatg
ttttacacatgcacatctggacacagtccagttatttcccttaaacatattcccccagtt
gttttcattttggtgcttgctttggcattcataaatttgtgagattaattgtgcgtcggc
agtctgcagacctggagctgggcaccacttccacagcgagacagctacaaaactcctctg
tggagaaataaattcacttagaaaaaaaaaaaggaaagaaagcacagacctgtggttcac
ttctgtttaatattgtgccactgacagtagacataagaaaatagcactgtctgtgcatat
acccagctagtgaagcctgagtgtgtgtatgcatgtgtgtgtgtgtgtgtgtgtgtgtgt
gtttcaaacacaagaaaggatttatcacgagctgtaatagagactccggggctgagcatt
taagtttattgttctcatctgatcattctgagaagcataaggctttctcttcatcctgga
aacaggccaacaattaaaatcacatctgttaaaggaaacaaactcagcttagaagtggtg
gaaaaggaaccttgttttaggctgtattttgagaagtctactatacttaaaaactgctaa
taaagagggaaacttgatacctgcttgtctaggtgtgtggagacctctcagcctagtcta
tgaaggccggaaggttcaagctgtttcccctggagccagaaaggtccctacacttggtag
ataccccacaaacaccatctgacaatggaaaggctgttctgtaaatgtgtctgagcaggc
agtccgttctcagtgggtactggtgcgtattacatcaatggctgggaagcacgcctgctc
tgtgttgtggtgtttctaaaagaagactctgcgtgtccacatacacaaatagctgggcat
actagacaaaggtctgaggactgagaacatcaccatgggaaggaaaccgggcttctcctc
ttatcctctgcacaaacacaaaaacatgcagctattggaaaagtgtgctcactcctctgg
gaaataattatgattcaaatagttggtatgctggctctgcagaacaagggagaaactttt
catagcctcctatgtttcttgaagtgtgctatgtgatggaagtttttacctaaatcaaac
cataaatctagcactgaactataagaaacattgtgttatcatattgggcaacttgctgtc
cttagactgtttaactctcagaatctttcctcaagtagatacatttgaaagctgctgatt
taaacacacacatacacaccatccattggtcttgacttatgtcagccctatggaatccat
gagatgatactaggggttaaatgagtgataataacgaatgtccaggcaatagggaaatca
tacaacacgaacaaatactggactccaagaaacattgcagtcaccttatggtctgacatg
gtaaaaggcagaggtacaaaaggaaagcttgttcctccactaagtgactaatcgcaaaac
taactggaagtatcataagaagtccacttagtctaggttgattgctagtggcaaaggtcg
tgtgttgatgccaaagtcagacaagagtggtcaggaacagaagcaaagatactgcaaaaa
aacacagctttgactctgacacatagcaacatattcacatatacaattattctttacctg
gtcgattcacttctgccttgcttgagctgattatctactgatggtggagtatctACTCAG
CCTGGAATCCTTGC
Primer
(+)ctcctacctgcccctacctc
(+)gcaaggattccaggctgagt


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