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Mouse element [ mm1608 ]


Position: chr9:41,543,061-41,546,044 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir125b-1 - Sorl1

Timepoints:
e12.5

Expression Pattern
facial mesenchyme (6 out of 6 embryos) 
forebrain (6 out of 6 embryos) 
hindbrain (rhombencephalon) (6 out of 6 embryos) 
midbrain (mesencephalon) (6 out of 6 embryos) 
neural tube (6 out of 6 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Fasta sequence
GTTCACGGGTGCGAGTCATAggtgtcagtagaggaattatctatctggtaggcaccagcc
caggtgcagtgtgaggctttgggacttgcttgctggctgttctttagtcccaggtaatcc
cctgcagcggtggcaggcctcagtcactccaccctaacatcctgaatgggcacatccgtc
tctattcatccttcagcctccccatcaccctctctcccatgcatatttataaagacctca
agaatcctaggatcccataaaaatgcaaagtacaattattattaatgatgatacagttag
caaggaagacatttgttatttctactcaattgctttcccccgggagcagaagcctttttt
ttttttttttttttttttttttttttgacgaggtgttaatgtgcagtcagggctactttg
attctcagtcattctccaggagaaagttggatcgcagactagggcggtgccctcctcttc
cctctctgcagtaaggcactggctgagccctggttgctagtgtagatgaaactgtggatc
tttatttgatttctggtctcaagaaacactgtcttcggatcaaggcgactagagttcctt
tctcgtcgaggtagtagtcactagtctgtgcaggcagcccgggctcatagatctagttct
agttccccacttatccacctggaactaagtgattttttttttcaaggcgaagagagaaca
cacatttccttatgtaagcagtcctgttctaatcaccattgtttctcagactagcggctg
gctgagactgggagcccgtttccattcatcgttcgcagccttccattgtaatttcagagg
agtttaaagaaaaatactgaaccagtctgggatttccctgtaatgacctacttcctctaa
cacacaccagaaccgattcaaatgtgaatttccacgaggaaagggctcctcgaaaaatct
ccattatcctgtgtccttcagaaagtaccttgcctttctttgggctcccatcccccgctc
ccaccctccctccagccccgcaccctgcctttccctccttcttaagaagactttcccagg
tccctcttggctgtggttgaacgacgttggctgcagtccatgccgcaacaaagccctggc
attccagctgtctgcgtctaatctccagtgtcagctctcgttaatgtgtgagcgtgaaat
cagagggggcagagctgcacggaatattaaaaccatgatcagaattccactgagatgctg
agaggctgcgagcaccattagaggaggctgtcaaatcacggcttcgcattaaataaaaga
tttctatcgaagcaaagtacaatcagtgaatcgctgagctaaattagcattttttcaatt
ggagatcgaaggtgatttattgttctacacgacattaatgtaactatgtgcttgacccgc
taaggcagctaatttttcatttaaatggtttctttccttcccggcgcaaaggctgcaatc
atatttcagctttgccgagcgatcagaaaagtcctggaatgctgcagaaatgctgtccct
cccctctccttccttctctttttccagctccagagccttcctcctcccctccccttccct
actaacctcatggctggtggtcaaggtcacagaggaagagtaatctcaaagccaccgact
tcaaagcctccatcaaagaagcccccacgtagccattgaattaaaagggagtgggggagg
gtggggtccaggcactggccattcctatcaacaagaaaagaccctttaactgccctgctg
gtaggacccaatccggggcatcctgggtccagtctctctggcagccctcttactgtgcct
ccccctcacatcctcccgagccccctccccggcacacacatcgcctcaagataatataca
tttccaattagcagagcacattctagccatgttctctttgactgccctaactatcttcct
ttttgctaaaaagcaaagctgtcattaatgcaatcctgcagctccattaatccgaggtac
aatgcggcttttctctctcgggctcccctgaacataaaaactacagttactcaagcaccc
ctcttctatttagattcctcgcccattgtcattcattacatacctgatgtaacacagtag
ccatcgaagctcttgaacacagagcaggagcatgagattccattcatttcccaacgccct
tgctttcaaaaggcagctggtatttttgttgtggttgtttttaagcacatggattttaat
ctctgggaattaatggatatattttagggtacgctggggcccctcacatgtgatcaactt
gttggatttagaacaagatgggcgtcctagctgaaccccggtaaattacattttcacttt
tctctgaattgcttcttatggaattagttcattgtgttccacattaagaagaaggggagg
agccggcaaggggtggtgggcagtggagctgacatctgccatgctttacggatgtagatg
tgatttctaaaactaaacagacattgtaccagtagctagtctacatgtttccattgtttt
cttcctatcccaacgtcaacttagtgagattacagattgaactatgtagaggaggcatta
aagtaccacctatccttaggatatgaggacgacaaggacagtccctgttccagggctgac
tatagacagatgaaggaagagtgccctgcctccatccaacccccacacagcctcaaaaca
aaagtgatgaagttccttcaagggtcagtgaattgggagaaaacttccctcccaccttta
tcacaacgggacctaattggcacacacacacaccaccctcaccgcccacctcccgcccta
gtcaaccaaaaggccttggagtgatgggtcaggggactgacctttgttctgactcagtga
aagggcctcttactaggccaaaggTGGGGGTGAGGGTGAGTAAT
Primer
(+)GTTCACGGGTGCGAGTCATA
(+)ATTACTCACCCTCACCCCCA


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