Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1606 ]


Position: chr12:112,930,182-112,933,710 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Trmt61a - Bag5

Timepoints:
e12.5

Expression Pattern
forebrain (6 out of 6 embryos) 
hindbrain (rhombencephalon) (6 out of 6 embryos) 
midbrain (mesencephalon) (6 out of 6 embryos) 
neural tube (6 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 4

Embryo 5

Fasta sequence
CCTCACCAGGACTCTTGCAGcctgtctgggggtgaccaacttgccctacccactacctcg
acttctgcctttgtgtctagccactctggactttctcgtgcactcctgcgtctgcaccct
cagagaggggagcatggaggacaccctgagtccaggatctgacctgtgtgtgggcccatg
cctccatcaggccttccacaggggctccctgttgtgcatggttatcctttttttgttttg
gtttggtttggttttgggtttttttgagacaggttttctctgtatagatctggctgtctt
ggaactcactttgtagaccaggctggccttaaactcagaaatctgcctgcctctgcctcc
cgagtgctgggattaaaggcgtacgccactacgccaggctgtgcatggttatccttagaa
acaagcaaccgccacaccctgcaccctgcaaaatgactgccccagctgggattgttgact
gttactcctggaagggcagcgagaatcaggagccccttatctgagtagccatctgcctta
attggcctcaggagcggctttagtatatagatcagggacgcgggagagggcctccttgct
cctgctgggaaaggctttccagttacaccctgttgggagaggagcgctcacatccctgta
aggggccctcacccgtgttctgtaaggaagccgataaacttcgtggttccctagagtgaa
ctttggcagagtcgtggcgtgatttgtctgtcattaggaccgaaagagaaggggacgatg
ttgagtctctcctcgggaaggaatttcagcaacagccctacctgactgagcccagaagcc
cagaccaaggcagccccaatactcctggctcctgctggctcctgcctgagacaaaggtgt
agggcgctgttatggtctgtgcctcacctcatcctgtggctgtctggctgtcatccctgc
ctatggcagtttctgagtttctaggtctggtcaccagacctttaccatggaagctccacc
aagaccctgcaaggccccagcccacaaaacacacaccctcagagctaccaggctctgccc
tgggatatcaggtctcaaagtcccccgccccctcatcctgtctctttagaaagtgcctgc
atgttccatctggggctggggtgtaatgggcacccaatgcatgtaccgtagcgcctggcg
ggctctatccattgaagtgtattctgggggacaccccttccctgatatatgtgaacagct
cttgctacttccttgtccctgttgttgtggccatcctgagctggcccctagcccgggtct
tctgtgaagccccagagaaggttttgcctgtggacagtgtagaagcagtgatgttgaaaa
tggcagttcctctcagctttaggctgctgggcccatatataactctgagtcctcttccgg
gtaaacgggtaaacgcaggagttccccgattgtgctcctagggatccttgagaactgcac
aaggaaaccccaaaggcccgactctcctgccactcagacatgcgcacaccacaggtatgc
gtcagtgctccagggccggagctctggtttctgggtcactgcccaagagcccactctggc
caggagacaagttgccccaataacctcaggctcgccccctaagtacccctggagttttcc
tgtttgtactgatggacagatagctgcacgagtgccctgaccaggcctctggcctagcct
ggcctctgggtggagcctacaccagcaggtgctgttacttgatcaggagcagcctagggg
atggggtgctatctgcccctcccccacttggtgaacttaacagagaggaagcctgggccc
ctccaaggctgagctggggccttgcagggtctctcctagaccaggagctgaggacaaagc
ggcagctgccagcggggtggggtgggggcccacagcctttgtgcttgtggggcccctcct
ggtgacctcaccatctaccagagaagggccctttcttcccaaaggcagcccttgggaatc
cgcctggggacaaagccgctgccaagtgggggaccagcgagtggctggccctcctcatgg
cataaattaagggggggtagaggagggcagttgcagctggcgcctgtgaagggcacacat
ccccccactcccacagagcagagggatactacccaccctccattcatctgcgcatcctgt
tcagagccggctcctgggtgctagccaggcacaagggctggacagtgatgatggtttttt
ttgggggggctctcaggtttggggagaactgggacttgtgggtcacagctgccatccaga
cttgagcagattggagagagcctgtcacatgaccatgaggagctacggcaacttggggcc
acacgcagtcctctgggggttgcgggaagtcgtcagaaaaatgtttgcttttctgtgtgt
agtgtccagtgacaccactgtccttcacatgaggccaagggtttcctgtctccagggcgc
ttcacaaagctccctcacaacttgctggccctcagccctgtctgccgcactctgctgaag
accccacgggatgggggggggggggaacagacagcatgtaggacttgccgggttccagaa
atcatcctaccaccctgagctgagcccaggtctgggacccgagcacactgagtcagagag
tggaagtcaagggcgtgaagggccctgtctagtgagcaggaagctcccatcgtgctgaca
tcctcgtgggggtggggtggggagtgggggttggggaaggatgctgcattcacccagaac
tacccaaagccctgagatgagatttctggggatggaaaatttataaagatctttcaaacc
attgcgcctaatgtcaccccgaggcaagggcgtgtgcagcaaactggaccttcccaaatg
cccactgtacaccccactcgtggacaaagaaagggagtcagtctcacaggtctatcctgg
ccaggagaaggccaaggcttccaggacactgggctcccaaaggtcaggggcacagagttc
tccaggggccccagaggccctgtgccccccccccccagcagatcgaggagtgggggtggg
gtgtaagtaggccagcactttgttctgcgttgctatggtgccatcgcctgcctgtgcaag
cttccttctgggcctgttcccaggacacctcgagctagtccccactacagccctccccag
cccctgtccagccccagcccgtcctcagtcagggctgctcccaggctccaagcccctcat
tatccttagtcttccccatccctgccttgatacacacatacgcaagcacacacatgtgct
tagacctaaatacaagcacatccataatgcgtgtttacatgtctgcacactgtcatgaac
tcacacatgtgctcacatgcgtatgtgcacattacacacagccacacacaggttgctcgg
tgaggcaccaggtccccagggccttaggcTCCTCAGATGGCCCTGAAGA
Primer
(+)CCTCACCAGGACTCTTGCAG
(+)TCTTCAGGGCCATCTGAGGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.