Human element [ hs1606 ]Position: chr9:109,181,334-109,184,572 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: TMEM38B - MIR8081 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TTTACCCCTGCCAAGAACACaccactgtggcacagtgtagaggaaagaacatgggaatcg ggagacagcagtgctgaaagcctggtggggaacacaggcaggttatggaaactctgcttc tcagtgtcctcatctgtgaaatgggaattgtttgttacaactgtgtcccaggattgctat gaacattaaatagcatcatgctttcaaatctcgaaatatttataaaatatgaaacattct ggtgacacacacgataaagaatggaagaaaatttggaagagaaaagaacagaaagccata ataaatttgattgcatattactcctaatagtactcttaatgtcataaaaccccattggtt tcatcttcagtattgtactgtatctactcacactacagtttatagctctggaatggtttg taacaaagaccttcattcaacaaaatttatcaagcacctactaagtgccagccttgacca tgcaagtgaacaaaatgacttgccctcgtggtgcttttatggctttaggaaatcccagga tgtcagcccaagagagttctctgacatgcacctactacagtgaggtcccgggtcttgcat tcttcatcttccacctaatataattctgggtcccagatccctcaaaaacccaccacttgg ctttagtccaggacaggaatttggagttttgagctaggctaatgtttgatgctcagaagt tggacaggaacatgtgctctgtgccagccatgctttttgagaactggtgtctgggtttaa tttctactgtctgtcagagagaagctttgatcagactctgcattttttcacttcaactaa gtgactagaggctactacttgcccatttctaccgcctctgtgtgagctctggtttggcag gaatctcagagatttatttccatgaattccctggaattgccctgcccatcatttctctct cctttccagtctcagcacagttagtgctggaggttgagtgagggagccagtgtgtgtcca ggaaggtatgggatgagaaatggggagggagacccacacatattgcagaaggaagtgcag caggaataagtgactgcagctgggtcttaatggcttttcttctctgccgtcattttcctt taagcccaaaagaaactctttgtaatacgtgttaaaattatggttcagatttctgatgat caagttacatagattaaagtaatggataccagactctgcatcaattcaggtataaatatg gatgaaatgaatgtacattatccactgttataaatctacatgttcaaggaaagacataaa tctcctgaacctttcctacctcaggctatgaaggtgttgttgttttttttcccagtgttt tcgatgaaattataatttggagtaatttgctggttttgcagaaacttccagctttttttt ttttttacaagaaagggtagagtatattatttacaatggtgagtcattaaaatgctccag gaagtcattgttgcagagggggttggagagggaaggggttatgcggcattccagatgtgc atgtgtggagagcggtggtgcatttggagaaatttatagcacctggttccattgtaaagg gtcttggcctgggggcatttctcttctcttcccctcccttcagccctatcaccactgtac acacaggggctcaaaggtggcagtgcctgatgggcacagggccacaggacgttgtggtct ggcaggaaagagggacttttcattccgtctaagccacaaagctgatgaaagtgtctgctc tccttgcagcctggggccccctcacatgagcaagagcaagtctcatagtgaaagagaaaa aacagagccaagcactctgcagaaagaagtgcatactccagctctgctgtgcaataactg catgtttgggtacctcttatctctttggttttcaaaatctgtagaatggagataatagta tgcattccataaggttggtgtgaggaataaaggaaattataggtgtgaagacacctagca caactcctttaccttcctgctgaaactccccacttgtagggatgaaagactcttggccgc cattgttccaaattgcatcataaattctcaaccattttctcatcttttatggctcttaaa tccccttagctaagtctactgctccatctacatggaggttcagctatttctaaagtcctg agttataaatgaagaactcaccaaggagacccaggctctttccataagattgctccactc tccctcctctgtggcatccacatcataagctcgcagccaccttgccctcattccagccag cagaagggaaaaggtgaaaagcagggcatgcccttgccctttaaggactaacctggaaat gacctgcttcactttctgttactttccactggcctgaatttagtcacagggctataccta atcatgaagggggttagggaaagtattctttacttgagttagctatggacctagctacat tcacttaccatggaagaaagggagatggatactgggggacaattagcgttctcttccaga ggaggtcacaggatttgtgccagaaactcaagtagagccatatgctggaagagagagatt ttaggctctgtaggggttgagaatggatgactgtaatcccatgaatcatgaaatgtatct gtttaataatcagattaatcaggatgtagccgtgtggcttgctttgttaatgtgctaatt ccagggactacagtaactgggcccgtcctattatgggtcaaataaaatttaccttcctgt gtagccacagacagtcatctcatgcctacccgatgtgctttttacctctgtacccccagt gcatttcccacagcctgccacacagattttcattcaacagttgttgaatgaatggatgag ttaatgtgagagtaaataaaaggacaagcaatgactgggcaacaggatgtgggtatgtgg ggatgtcagtgggtactttcataaatagaaccaaaccatctctactctcctgagcccatc acctcccttactcttaagaaatgtccttgctttgaatttagacagagaaaataaaaaaac attttcagtacctacactggcccaaacaaacttattggcatctacattcatcctttctcc cttcccttctgctaaatcgggtaaagtatttccctgggaaATACTTCCCTCGGGCTCCTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.