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Mouse element [ mm1594 ]


Position: chr6:84,972,955-84,975,933 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Exoc6b(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACCTCAGTGAAGGGTAAAGGGagcctgcaaggagacctccctcctctggtattgattctg
gttgcaggagaaagaaaagcttctagtcattttaaacaaaagaataagtctcacagtggt
actattaatatctgtacagtcaaaaaatgtcaaattcttcattttagggccaggtatgga
ggtgcatcttttatcccagcactaaggaagtcagaagtagaaggatcaattgcttgagtt
caagttcaaaccatgcctggggaacatagcaaaatatcatctcacaaataataattgtta
tttattttagaagcaatgtccttcccaatgtccagatataactgactgaatgaacataaa
tcttctctagagaaatatagtttaattcatagttctaagacttctgagaagtaatagttc
tttaaagtagaatttaagtatcaaaaaacaaatcttagaacatggatagttttttaaaaa
aaaccaacaacaaagcttaaaaataataaaaaattatttacccaggcttaaaactgatat
gtgtaaactaaaaataagtgatatatttaaagaaatagcaaagatttaaaccaaaacaaa
aacttaaacatttaatcccaaaactgaagaaattacaaaatcactaccaaaagcaaatag
gtagggccagcaagatgactcagaaggtaaaggtacttacctgctgctaagccttacaat
ctgaattccattcctgggactcacataatagaaggaaagaatcaaatctggcaagttgtc
ccctgaccgccaccatgcaacacacatacagacatgtataaataaatgtaataatagtct
ggttttaaaggaataaactacaaaatctgttgaaacacctggttactcttcatttggaga
gatacagagtgagttatttcttcacaggcatggtatcaccatttcccacttaaccctcat
attgacaataaaaatctgaactgaccttgaccctaggaaaccatgtgtagttgggagtaa
attccatcaaaagtattatccttccattttcccaaacccctcattctatcctccagtcac
actggaaaacaggcctaagaatgaatgagcaccattaaggacatttcactggtagagggt
taacattggtttgcttgaaaatttttatttgttcattatctttgaaaggcaccacataca
tacaatttatttacatgtgtttcactcccacaggaccatgagttccttgagagagttcac
acccggatcaatgcctacattccacagagaaggcattataaagtgacacagggcctatgg
cagaacccaaagacggttcaactttctacgagaacaggcactagggatgataataaacac
tcttactaagaagtaaatttgagtcctattactgcaaataacctgtacttcagctaaata
ttaatacagaaagaaccagaggaaaagaagaaagaaggctcaagggaatttcttatagaa
gaatgtctgggaataatttgttatttccctagctctcctctagcccttctggaagctggg
agcaacaaaggctggttccaagaggagctggtgtttctagtccttactgccagttgaagg
gggagggtgacagcagtccctaagggcttttaggaaaaattgcttccaggtggaaatttt
ttatggtactatgcagcctgcagcactgccccccttctccccctgccttccttcacaact
actgatgattaaaccatggacaatcaggctgcaacaatggaaacagtcagacagcttcca
aacaacatggttatatgctccaaattatcaagtttactctcaattcattggcaaagtttt
gttttgtttttaaaggaaagggcaaggtggtgtttattaaagatttgtggaagtagccaa
gaactctctattataatgataggcatcagtacccaaccagccccacataacacagacata
gaaataagaagggacaatcttctgtgtcctgttacctacagatttttataactttagtct
ggcctggattgaacactccattaagcccttctgtcatcataagagtacacagggaacttt
gacctggtgtcatgatgaaaagctagatcagtttacacctgaaagtggtactgaaaaggc
tctgtctgtgtgtctgtctgtctgtctctgaaatcaaagtgaatgtgtgccaactcgaag
tgggggctatattgctagccatgcaaaaagcagagaaaaattaattctatgacactgacc
gaatctgggcaaaattgtccccatgacactaaaactgaagaggatatacctaattcagca
tttctaaatcataataaaaggaagcatcttttaaatctgtgtcaaaatgtcaaatgaaca
tttctcatatagtaactcagctatccctcaaatataactgtggtggtttgaataagaatg
gccccataggctcatatatttcaatgctttgtcatttgaaaaaggcactatttgagaagg
attaagacgtaacatatggtctggttggaagaagtgtgtcaataggggagggctttgagg
tttgaaaagcatatgccaagctcagagactctctcttcctgctgcctgtggatctaaatg
cagaactctcaactacgtctccagcaccatgtctatatgccaccatgctccccgccatga
tgataatagactaatgcagtgaaactataagcaaggccccaattaaatgttttctctcct
taaagttgctgaggtcatggtgtctcttcacagcaatagaacagtgactaaaataataat
cctcctagaatagttattatcatcagtctgcatatgaagcaatctttccaagactgctat
tacatagaaatagttccctttattactactaaaattaccacaattttatcaagaacaaca
aaatgagcttgctggtggcAGTGCATGCCTCTGATCTCA
Primer
(+)ACCTCAGTGAAGGGTAAAGGG
(+)tgagatcagaggcatgcact


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