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Human element [ hs1594 ]


Position: chr5:134,355,508-134,357,399 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CATSPER3 - PITX1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAATCCCAAGAGGTAGGCAGGTggggccaatgcccgcttgacagagggttactggggttc
tgtgaggtgacatcatgccctgggaagagcccagctcacgggctaggatttgggcttctg
gactccccgaggggatcgtgccctcctccaggcccctccaccagcctgggctcagtggat
atccctgcctggaggggctgggtgagtctctgtgagcctggggggctgggtgggcttcag
ttgccccactgtgggctctggactgtgggagagttgagaggccttggtggagataatgcc
aagcttgggagaagccaggggttcaccatgaattgtgtgtgcctgtactcattccggcct
tggtgacaataggaatgccagcttggggatggaggaaggatccttggccacaccgtgcct
ggggtggggtcttttgtgtaagggtatcctttattgagttgcatttacccagcgggagag
aggtgtgcgtgtgtgtgtgtgcgcctgtgtgggcatgtgtgtgcacaaagaggctggagt
ctgggtggtgatgcgcatccatcccagtgtgtcctggaaagttcccagataggccacagg
agggaacggtttggggaaacccttgctgggccccgccacagcctggcaggtggtgaagtg
gccagccactttgtggctacgatgccttagagagtttgccaagcactttctgtgaagtca
ttgggatgttaaacccttggttcaattaaatgggttaataagcattgtctgattttgatg
aggaataataatataatgtgataatagcaataatggtgctattagctgcgattattacac
gtgctgcactgtcccaggcatggagggggggcggcttgcattcccgcatgctcaggccgc
attttccactcataaaaccccattcttcaaagtctttccagcccaactcccgatatccat
tttcaggacaaattaccaacacttaaaaaaaattggtccattttgcgtgaaagccaagtt
caaattactgttactttcccctttatgttggaaacttaaaaaaggataggggtgggagct
gagggggacacaggggacagatacaggaggcgaggcagaggagggggaaagagagagaac
ggtgtatggatgaagaagaaaaaagcgagccttcttgtttcagtaaaaatgtatttctgg
aatgatgtttcagtttactcaggcagaaaaattagaaatggtgtgcttattaaacaggct
aagtaagcatgactatttttagtagtgtagtaaaaccttggtaatttggacctctttaat
aaagattccatgatcatggtggctggcaggcacacactgtgtgtgtgtgtgttgtgtgtg
tgtcagggcaaggtaggggtgcagatcggttgctgagttggaggctggggagcggggagg
gtgcaagaagggacggaaggaaaagggaaggactccctcttaggagaacctgcttcaaac
actgaactcttttgcttagtaatcaaagatcgttataaattcttctcactgaacactttt
attggcacctactagtatgacatctgttcaaagaagaatgtatttgaaaacaaaagtttc
atttctgtaaaaatctgtaaaagtttacttgatagctgtcatactggcctccctcaaatg
aggctgcatcccaggtaggtgatgactggcacctcagtgggaggacaggggcagtgggcg
gaaggctattccctgtcctgcgggtcacagggttttgtatttttaaaataatcattattt
tatttcatcattgcaaaactgatacattgtcagtgcaaaaagaccttgaaaggaacaaat
ttaaaaaatgctCATTTTCCCCGTCAGAGGTA
Primer
(+)CAatcccaagaggtaggcaggt
(+)tacctctgacggggaaaatg


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