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Human element [ hs1592 ]


Position: chr20:39,461,549-39,463,625 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAFB - TOP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCCATTGGCTTTGAAGTGAggtgtgcaggggatggtaaggaagaaggaagccattcccc
tctggggatcggcagaacacacctactttacaaaacagaccttattttaataaaattttt
aaagaaattatttgacttatttttaaacaaatatgttaattttatctgaaagtgggtcag
atgaaaaataattaaaaacaaaacaaaaaaaactttaaacaggggttcttgtactatctt
agaactccagtgggtcaagcaccatggtgcagtcaagtagctgccttctggagcctaccc
cagggcatctggagcagggccctgaacagagagctggtgtctgttccattcccatctaaa
aggtgttgctggcccataagctttgagaggtggagaccatccattagggaggagagagag
tggctttcccactaagctgaaagtgtcctggctgaaatcccaatggcttggtgagactca
tgccaccaaagtggtcctctatggcccaaagtcagagtgaaagaagagagcccagacttc
cagggcttacatctgagaccagagcaaagtccaggcataagatggggcccatgtgcctgg
accactgatttgcagaaaagcaggaatcttccctgcaacctggtaagatgaagaagtctg
tttcgtcccctttgaaaagctcttaatcatgataggttctcagttaaattggcacatccc
ccacccttcctcttcccttcttacctcctcctccttctcttcaccccatctctgggctcc
actcccttccagaccttcccatcctgcccctccctcaatgtctccttaaaaggcctttca
gggactgaaccagcagtgcctgagtcagtggcagacggcacaagaggccaccagcccgac
tcctctacctcgaggacactcggggactgtccccttatgcaaaacagcaggcgcctgaat
tcataattggacgttccaaaatgtaattatgaaagatgaaatgctcctctcaatgagaaa
gctgtaaatagaataattaattttctgtttgcttgaacaattctgtattatggatcttat
agtggaactgaaattaattaagtgcaccaggatttatggaggaggtgaagagagagggaa
aaaaggaattaatccggagtaaaagatagatgagtttggaagtgtaatgatgtgttagcc
tggggtattctttaacaaatttaccaggcacgttctgggtacaaaaggcatgcattgaca
gaattatctcaactaatacagcagctggtcaaaaattgagtaagagggaggtggacggat
tgggcctgtgaggtccctgaaggagctggagatgggggctaattttgagctggccaggag
ggggtcccaccaggaggagaaaggggcccaaccaagcagaagcttctatccccaccgcaa
agcaggaaacagctgaaaggtactaggagttgcagagaggtaaaccgggagggccagaat
gtgaggactaactgagggagaagctcctcagcactcctgagccccccgaccaggtatgtt
cattcctagcccagcaatactttcagccccatgcactcatccagtatttttccactactc
ttaaacctagatgggaagtgatatcacatgacttccagggccaggttgtgaaaggcaatg
cttctacctgtgccattacaacccaaccaccatgctgtgaggaagcccaactagctcaca
cagagagaccctatgaaggagaactgacagccagcaccttctgccatacctgtgagtgat
tccagcccatcttccagtcttccaacagacatcatggagcagaggcaacctatccccact
gtgccccatccaagttcctgattcacaaaactttgacagattataaatgagtgttgtgtt
ttaggcccctacactttgggatgatttgttatgtagcaatatataaccagaacagggtcc
ccacttaaccagagtggtgccctctttcatctgccctttatgtcagaatcccacatcaga
tttctttttttggaggaAGGAGGGGTTTGTGGCTTAA
Primer
(+)ttccattggctttgaagtga
(+)ttaagccacaaacccctcct


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