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Human element [ hs1591 ]


Position: chr20:39,372,456-39,375,024 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAFB - TOP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTAACCATGGTGATGGCAGAgctagactccaggtcagtgtctgttgtccctcatctgggc
cattacaggtcaccatcaccgggggttcctgaatgatttcaacattacgtagtttaagag
ggaaaagtcagtccatctggttgtgtatgtatgggcatattttatatgcctgaaagtcat
gagttagaaaagcttagagtgtctgactctcctctgtcatgccagctcccaggtcatagc
ctggatcaatgtaggtgctcagtagacacggttaatcagacaagagaagaaaggagtgag
aaaagcggggagggaagggagaagtcaagaaaatgtgatgaggggtataaggggtaagca
acaaagagacagaccagaaggaagaggtggaagaggtgatccagggtcggagcttcccgc
tgccccagccctgcctctgcaaatcgagctcagcccacttctcccaaaagcatctccgtg
gctgggcgcagagggctgggcaccctggcttgagctggaaagccttttgccaactccatt
tttcctcttaaaccatgaaggagtctaaacgtcagctaaatgagtaccccatatgtggaa
atattcattctcacattgatgttttccttataaaagcacgttgttttatgtgtgggtgga
ggaactcattgtaaactgttaaatatgatgtaaatgctaatttctctgcaatgccctgta
aaggaactccctgggaagtgtgtctagtggaagaccataaaagaaaatggtaaaaataaa
ttagggagaaacgcgggtggtagcatacggtgtctgttttgccaacacgcagccgtgtgt
cccccctccaagctctggccctaacaggagaggatttgcataactgcagtgacagatgcc
accacttccccacagccacccggccttgacaacttttgggaaacattctgccagggtttg
cttccaataaaaacaattcaaaaaatcaccaagcatttctctcttttgcaatttttaata
aaattacggtttctagaggtttggatttcaatcctgaaaagaagaggcacaactgacatg
atgcaaatctgcctttaaaaccaacctaggtttcaggttgctcacccaggcttgcagtaa
taaccttttctaaaaacctccgatgcactttggccacattcaaaagagagaacatggcag
gtgtctggcgaacacaggcctctttctccatcagtagcctggccagtcttggcactctgt
taaccaaacccagctctggattttaaccacaacccaaattttgtcacacacaaaagaatt
agaattcagggtcacacagctatttgtggaatgaatattagtatattctttacaaatgca
tgatgtatgaactgcatatatttctttgataaattgtttttaaatatttcctccttttta
ttaatcaaagaggaacctcgtgtatcactgccattttttcctgtttttcacataaattat
tttcttgcaatgttcgtttgtattattattgccgatattaagcaaagactttttttgcct
tgtaaacaagattttgcttacagctaaatgaaagaagtgaagttaatcacattgaaataa
taggtttaaaaaggtaattcagtggtgtgggaatgaagtttaatcttcagcaatagaagc
cgtgctaagagaaatggcagaaaagcttgttctgtaattaaatggtatttatcacaggca
ggtcagctctgctgggtgagaggctccaggacttcacagagaagaggaaggcaactaggg
caggaaaaaagggcccagagtagagcccgcagattccaagagcgggctgggaggaagagc
taggtgcagtgacacctcctggggtccagctgtctaaccttgcacatgtgtatctcagcc
cacagaaatgagtctggcaaaaatgccaagtgcatcctccacatccttccagaagggacc
cgatgtacagcttccctagtcagcattaaaccgcacgagcttagaatttacacagacctg
ggaccaaatcatacagctggtagccccactttcttcatctgtaaaatggagacagtaatg
caccaatctcctggagttgttatgacaacttgcaacacaagacgtaatgtgccatgtacc
atgcctggcactgtagcaataatcaatgctaattatagcccactaattaggattcagacc
tcaggcaaagctagtgcaggttgagaatctctagcccaaagaggaaaaaaactgagcttc
tcaagcagatgtttctcaggcagccttctgcaaatgtggccaaacttgtcagcaaagcat
caaacctggtataaactgagggcatcagcctgcagctgagaaggctgtgggctgatttca
agatggttctcaaacagccctctgcaaacatgttcaaccctaataacagagcaagtcagt
gagttgagccccatcccagatttctctttccagaactctgatttcctctgggagctggag
gatatgaaccccagatggcttcgctgggcTCAGACCATGCTGTTCATCC
Primer
(+)ttaaccatggtgatggcaga
(+)ggatgaacagcatggtctga


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