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Human element [ hs1590 ]


Position: chr20:39,367,240-39,368,612 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MAFB - TOP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCAAAATGCCATAATCCAAgaagggttctgcgccttgtaatttacctctgtaaataggg
ctctctctgtgcctttcatcccccaattcagtcatctccttatttcttattttgggggca
atctcagaactgcccgtgaagacaaaaaaaattgtgaatttcaggaggagggtggaaacc
tcgtcctttgggaaaattgagctgctgaacaaaaaactcagcaggcaagcccctcatagc
tcacagaggatgaagcatagaatattttaaatttcatccagagagaactgactttctgct
ccttccattcaagagcttttgttttgcatttaaatgacaagggagagattggggagaagc
cggcagcttcagcctctgtgaggagggaagttgtcgcccctctgaagtggctgcgttaat
gtcatgtcattacaccgtattgctgcacaggttaatataattgggtgacgatgtgtgagc
aatgatccgtgccatgttacagctctgaaacaaatgacatttaaccagccagtctgtaag
gctccttgttatctacatggtgagcaattgaaacggagaagcagacctctcgatgagcaa
ctgataaattagttgttgggtttcctcgacagcctggatttataagagcacaattctaac
ataatttattagatctataaacagacagatccaatgtttttactgagattacatcttgtc
accctcagatattgtgtcgctgacagccctgttataatttatttttattattctgataag
gtgttgtttccagggatttatttatttttccccctaaaaagacattttcatttttagctg
gaaaggaatcagaaactttaatgctagcagatctccagtagccacccagacagcttttcc
atactatgactgtgagcttctaaagagcagagctgaagttttagcatgaattagtgcatg
gcccttggcctggggaatggcaggaagacataagggagaatctgtcgggtggcattgggg
cctgtttgaggatcttcctcttgttgaaacatcagcctgtgattgatatccttccataga
gtttctcacctttgcaggctgcccgcctccctccacacctgcctttcaggccaggcaggg
cacagaagagtctttcctggctctggccatcactcacctgagcctgaagctaacatgtag
cttcctggacaacagtctcccacaaagctattctaagccagctcctcctgaccatgtaaa
aagaggggtgcgtgtctactctcaaagcccctctaggcaaagggtcacaggtctgagtga
ccaacatctaccagtaaaggacagtggccttgcCAAGAACTGCAAGGGAGAGG
Primer
(+)cccaaaatgccataatccaa
(+)cctctcccttgcagttcttg


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