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Mouse element [ mm1588 ]


Position: chr11:60,178,591-60,181,183 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Lrrc48(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAAAGCCAAGGTCTGAGGTGgtagacacacaatacacccttttcctagagagatcaaaca
tccaagttattccacaagggctttgactatattgaaagaccatgcttagtccaacaaaac
cccctctgcgtaccaggcttcctggcctcagctgtggtcccatgcatgctctgtgtctca
tgctcatgtgacaaacctttgctgaagtgaaaaacctactagatatagggcatttgttct
atgtccaatgagacagagatggcagtatatggttctttttggggtagccagccataccgt
catcatctagacgaatgtgacagcaagttagggtctcaaaaacagggaagcaatccctgt
ggatggtaggagggcagtccagataccaaaacgtgtctctatgacatcacagtggcctga
cagtagggagacaacagccgagactctgctaataattactgagtgctatggtagacgtga
ccctgtagcttctacagtttggccaccagcccagggctgtctaatacctttcaagattcc
atttccacatatattaatcagttggcctgccttcagtcctaactgtacacccaaatggct
tacatgaacaggagcgagtcaagttattgcccacatttaagtctgttcatcaaagacaaa
ccaaaccctagaggcaacacagtcttcactttgcatgtcagacctgagtgcaagtgaggt
gcaaactttctgtgtctcagttttctcacctgtcaaatagagaggggacagtaactcacc
agcccaggctctctctaggggaggagatataatacgagtacttggtgctggagcatctct
ctctctctctctctctctctctctctctctctctctctctctctctctctcttccttttt
ctttcctgttctactccccctccttctcccttgtctggtatacagttgtaaaccttaaag
tcatgaccgtccagcctctgccacccgaatgctggtttacatgtgtgtgttcagcttagg
aacaggttcttaacatgcagagggctgatatctttgctgagggaaagaaagtcaggggtg
atagtcaacctgattccagagccttgaaagatatgagaaccagctgggcaatggtggtgg
tgcatgcctttatgcctttaatcaagcactcgggaaggaggcagacagggggtggggggt
gggagaaagaatttccatctggccagaggaggatggcttcttagtataaggtatgtgagc
agaagccagagaggcatctgggaaacctgcatggaagccaagagtgcaggcagcctggga
gctgagatcaggttgcagacagcagcatctagagaagcgtcagcatggaaactccgtgct
cgggcatgtccagggctgagctatgtacaggaaggaaaagcaccacagtcagggtagact
cgaggggccgcatgaatggttaatcaagggtagtaccacctaagaggcactgcctgaaag
aaaaaaaagctggactccggctggctggaagcaaggctcagccagggccttaggtgcaag
tgatttgcctgggaggtgacttctggaaactaaaatgatccagcggggagagggaaagcc
agagctgggtactgtggagatcgttgctatgggtggtggggtcttgattctgccgggtct
caagaacatgcagacctccttccctcgttgctggagcccgcctgaggcactgaccttcag
ttctgtcccctcccccagcagctagggtcactccatgcagattagctccttctcagcctg
cgggtgagcctctggagacatggagaccttgctgacacagaagatgacaaggtggaacgc
tacccggaaaagtctgtcccggctgcagcatctgctgcaaacaggggcacttgtggtgtg
atttagagcatggcagagagcttatcaatagggtttcagggatactatgtgacttacacc
tccgggctcccacatccttagcatttcctcagggctgtttatccttatagcatccttgtt
tatatatgacagggaagagagaaggagaagtgtcctctccaccctcagtgtccctttagt
ctgctaggccattggaggttctattcctaccatcagactatgtcatgtgtgagcatgggc
agctgggcagcttcagtgaacaacaaagtaaatcaatcatcgacttgttataagtatgaa
gtctgcctggtagggccaaaccccagaagttgtatagtctcagaggtttgctatctataa
cagttcaaagcatttcaactcaccagaaccttttccaaatcctggctccaattacccagt
ctgccctctgctctgtgagataaggaatcctcctactggccagcaggggtccaagtaaga
cctggaaggtgtgactagcagagtcagccctgttagctgccacctaccacctgcttgaca
ctgaaccggtgacttagaattttgtgtgtctgtttgcacatcgataaaatgtgattaata
gtagaccccagggttgttgtgaaagccaaatcagttacactactatatgcctaATGCAGA
ACCTGGCACTAGT
Primer
(+)CAAAGCCAAGGTCTGAGGTG
(+)ACTAGTGCCAGGTTCTGCAT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.