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Mouse element [ mm1585 ]


Position: chr6:83,384,768-83,386,365 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Tet3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGCCCCACCACTAAACCATtctcctagagcttgggggacagaacaacaactcacatttt
gaatatctagtctccacttctctccaggaccgggaggtgggagtcagaaggaaccctctg
caccccagctcaacctgggcaagccagcagagacagtggtctgaggggtacgctcaaggg
gaaacatagctgaggagtcagtttgcagattcagagcaggttgtccactcacagcccttc
tcggggcctctgcctgcctgcctgacaggtgtctcctgcctccctgcttatccccatcag
tagagcagctggcagagtcttagatggaacctctctgagggacaggaaggtagatgacag
aacagtccctttagtcaattgcctgttaagcaagactgggaacaaagcttgcaggccaga
aaaatgacctgggacttgctaggctaagtattctacattttcttttttgagagaacacag
tgggtgctgcagaggggagagagaagcagaagccagtccgcagggcagagctggggaatt
ctctgatagggatgagctacaaacctttcaatgcctttgtttccatgcagagcccatgag
gtcaggattactcatgaggacgcatgggggcggggcgcagaaatccaattacttaagcac
caagggcacaagagttcctggccagacacacaaccaggatctgcttagaccctaatcctc
ctacacttggcacgttggccccttaagtaatatttctgcagcagacagtttaggcctgtt
ctctaggcagctaagataaaaaaaaaaaatcacatttttacattcatgtttaacaatgca
aacaaacaaaaaagctggagagcctcagctggagaaagtaggagccaaaacccttcaatt
aaagccacccagatgacaggggtgtccacccttacagaagtcacactataaggtcagccc
ctcagaggaaagggctacacctgtaggttaggatcaccgtatggaggcctgaagataaag
gttagtggtagaacacttgcctagcaagtcccaggttcaatcctcagctcctccagaaat
aaacatttttaaaatcctaaatgaaagaacagcctggtggaacagggctataaccctagc
tactcaggagactaagaaaagatcccaaattcaaggcctgctgagctgcacaatgcatta
aaaagcctgggcaaaaagaggactgagcacattacagtaggcaactgttgtgtggcatgt
gtgaggtcccgagcgcacacacccatcaggggctcctgtggttcagataccatcagattt
ccgagcaggcagagggatccttgtctacagaagctgagggacaggtcaaaccttctggct
ggagactctctctaacaaacagcagggggaggaagagtggaggggcagtgtctagaaagg
ggatggaagcctgcaaagcaagagccctactcggggggggggggggggggggggggcaga
ggcaagttcaaaagcggtgctgtccacggtctgacccggtccagcatcacatactcatca
gttacaggatgtccaagaGCAAGAGTGTGGAAACTGCC
Primer
(+)cagccccaccactaaaccat
(+)ggcagtttccacactcttgc


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.