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Mouse element [ mm1582 ]


Position: chr9:107,546,342-107,547,707 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gnai2 - Slc38a3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTCCCTTTTAGCCTTCCCCGaaggcttagccttttctccaaatataggcagttcattaca
aagaaaaaccttttaaggctgggcgtggtggctattgctttagtttcagcgtttaggaag
cagaagcaggcagatctctgtaaagtcgaggctagcctggtctatataatgagttccagg
ctagtaggggctacatggtaagatctggtcttaaacgaacaaacaaattattgtagataa
tgtgtgtggtggataatgaaagacagctttgtggagtcggtccccgcactctatctttaa
gtttaaagatatccttaaggtttcagggatttaactcagacgtcaggtttgcacccgtgg
gccttaaccgattgagccatgtagtcggcccaagaacacttctaaagtccccataatggt
gttttcacctttctgcaccccttcatctacaggaagtatttctgccagcctgacagagtc
caccggagtatttcactctgttaaaagctgggggctgctcaggcatggatcatagaactg
cgcgatgaacacccacaatggggtaccgcttgtcttcagactttgcatcataagtccccg
ttggcgacatcctaagttctctcattgcatccccacaaaaccaagctcccggccgagttg
aagccggaagtggtctcctggagagctgcccgcctcttccgggatcgctaggccacagcg
cgcgacttcagaggcttcctccgcggaggagcggcgccccctggcgggcacagagcgata
cggctcagcaaccgtggcggccgggcttctcatcttcctctctctatagtcttcacttgc
cttcggctaccacttgtggcttcttccaccttcctggtcttcttgtttcttgccttgggc
tctagtctcccctccgcggaagcgtcggtacgtggccgttgaagcctagttccacagagc
agcccttgtttggcatcttcttgcttgccccgcaccctattgctctcctcttctcttgcc
tggtaccagaatccatccatccatccaagccggcgttccttgtagccattattagctggt
ccttagaacgcctccagtgacaactctctttcctggtgcttcttacactctgtttaggac
tctccctctctttctgtttttacttcacaattgagatcggagattagaaagtgatttatg
tagttctccactggatatcttgcctgcttcctgaagaccaaggcttggggtgggtcaaag
tgtccagcccgagacgtgcgctgtgggtgttggaatgcactgtggagtttgaccctaaag
tcaatgggtaggataaggacagaaacTGAGTTCTACCTGAAGGCGC
Primer
(+)ctcccttttagccttccccg
(+)gcgccttcaggtagaactca


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