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Mouse element [ mm1580 ]


Position: chr13:114,703,685-114,706,240 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Arl15(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAATCTGCATCACCCTGGCAgatataggtggttacaagaatatttgtcatgagagtggtt
ttatgtgttttagagatgggagagagtgatgcttgaggtggtgacatcagcggacactct
aactgtcctgaggacagtggtaatgttctgacgaaaagacctaaggaagtaagtggcaga
ggtgggtggcagaggtggacagctgtataggaattggagaccctggagtatgtgggagtg
agtccaatgatttcagcaaaaaatagattttcctgttaaggaccgcaagatgaaaagaag
ttagtagaatttgttttctccttgggcattgcaggctgctcagtctgaagtttcgggtta
agagggggaagagcctatgttgttaagttccttcctcgtagcttttggtgacacttcagt
tcatctgaaggacggcgaccagggaactggttctctttaaatgttctcaagacctgactc
attccaaatacgtaaaacatagaaaggcttaacctgctttttgtattttcaagtcctaca
ttctgttgggaaacattctgttcacataatggcggtggtggcggtggccgtggcggcgta
tataaaatggattagtgtttcacttttaactaaatttgtatttcttcactccttagggga
aaaagcgtatctgtcctaaaactgatgtgggcgaagccctgacagggaggtgcttttgaa
agcatatgaagcttgagttctgttacagacaaccgtgcctagggattgcattgttggttt
tagtggataattctgccattatgaaagtttatacttaaaaatcagatttcctatccaact
attacaagataaaaatcctatattgaaaataagcacatattttcaatttagcttcctttt
ttaatctcctagcttccttctttttgactctgatctctctgatctgtaaatcgtgtgaca
gatctccaagtctggataaccaggcatatatgagaatcctggattggtctctttaaatct
acttgttccctacgttccctaactttgaaagccccactttcagttaatctcgaaaccccc
gtatcaggcctggtgaatactcctgatcaaggatggctgactgatgctcagaccgggagc
cacgtgggcccctggtctggctcggcgcggcagcactctcttccattcagagcctcagat
gtctgcccctctgcaaagccgtgaggccagtgtctaaagctgctaagcatgaaattccct
gcttctgtttgtttcttttgttgccacgagttaatagggacagagacaggagacagccca
gaacaaagcacaaataatggagtatttcaccccaaaaaaggaatgtgggttgagaaatac
aaagagtactgcaaagacagacttagtgtcccgaggcactgtgatatatctgccagaagc
cccagcccagggacaattctggaccagatccttcatctgtgagctcccagcctacatggc
ccaaaggtttgacccgtgttctatgaaaacagtttattgttttcctcacgagggttttaa
agggacgtgggatttttcacctcaaaaagtggattactcttgccaggcagtgaagtcttc
cgggctgtctggtggtcagcccggattagtatttttgttacacttggtgtggtttgatct
tacactcttctcacaagtttgcaagaactcaggggcttccatgactgtgggatgtgtttg
acattcctttctcggcttacaggtagagattggcttaaagaaggcacgttccttctcgat
cattgtcttgtgaatacatttctgtgagatctggcttcctaatggattttccctcccaca
actccctcaatcagattcatttgtttttcttattagcttactttatgaatcaaagtttat
acatgcatatacatatatgcacatatattttatatgtatgtacctatactgtataaatat
atatatttatacatatgtatattttaaggactgttttcccacatttctgtctatagaatc
agaaatctatgtcccgcatgggcttctcttcaaataagtgttgttctttccaaggacaaa
agggggttaaatgaaagaagtgaattggccaagcctcctttctttttctgctacctattt
tagagggttggtgtaacaggcacaggaagagatggacaagagacaagggtcatcaacaga
gcatcactgtatccttgcttggaacgaaaggcacatcgtgatgaagctgcacgtcatggt
tcaatggaggaatgagcctcttctcgagaactctctgatctcttctaaacaactgaacca
tcccacttaggacgttctggtccctgcgtctggatgtaacagttcccagtgcataaggcc
aggagtctggaggagctcaacagcccgtgccgcagccctgacgcctacctggggacgtta
tcttacctaggatgccctgaagagtgactctgaagttacttgtccatgacgcactcaaag
atgcgagggactgagaTTTCCAGAGGCTCCCGAAAC
Primer
(+)gaatctgcatcaccctggca
(+)gtttcgggagcctctggaaa


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