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Mouse element [ mm1578 ]


Position: chr16:72,690,938-72,694,980 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Robo1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCATGTGTGGCAAAGTGTGtatgtggcaaggtgcttgcttgtgtgaagggcaaaggaca
gctttggggagtcggttctctcctgacaactgggtgggtcctgagaatcaaactcagggt
ttagtcttgaaggaaagtgtttttaccctctgacccaacttgctgggtctataaaaagca
acttaaactgtatttatttcaactctgtatttaatgtttatacttcccatgagcatagaa
cttataaataatcattcaataagtatgttgaaaatttattattatttctgtgtttgttct
gtgtgatagcatgcctaactccttttgactttgacttatcaacgtatgatggaaattgac
ctatatgccaaaatctgcttgagattcaatcatgcttatctgtgtatggaattgtggtag
aaccatgttcagggtatatattaccaaataacaaagactgaaagggtgagttttaaggtg
agaaataatctagtgtattaaataacaatacatattacttagctgggaagaaaaaccaat
gttggcaggtaattcttttattcccttattcttctgtgagagctattgctgtcatgaatc
actaaggaggcataaaaatgtttagccaacaaacacatgccttgcttttatgcccattgt
ggactattattttgactttctctagtttctcttagggctctgctaaattatttattgtat
ctagttgcattgcaaccacttggaaaacagtaatttgtatgttaaatttaaacaatggtc
ccaccaaagtgtctgtttctttttttcaaggctacattatttttttttaaagtgaattag
gggataatcgacaataaggattaatttattcaccagaaggtggacacggggcagctgttt
ctgtttctatagcccctgaggctgctggaactcagagttacgtgctaaagcagacagggc
cattttcttcctcaagaaaaagctttattcctctgttagaaagaattaatgtcttacttt
tgaagctcggatccatttttttatatatgataaataatagatgttatgttcctcagaatt
caaattctgtgaggtagaatcctgcagatttctttcccaaatgccagaaaactccacagc
tacccttttgtcttctgtttcaatcatttttgtttgcgaaacagttacttgaaagttatc
atgaaatataatggccagctttaaaacccagaaaaggaagagaaaagaataaaccagcaa
ttacaagacaaaaggttttcgggttgggaattaattgagtgacagaaagaccgccccaaa
ggatacagctgaacacaggccctttgcagtctaatgcatggagatacagtttttcatgtt
gaaatccatcattgattatcttggacccagttatgtttcttgcttccagcaggtggggat
aaaaggtctctggagataaacgcaagccagtgtgtcccataagagaaatgctagactgca
ggcttacttgaggctccaggattacagtgtgaaccttacaggagaggatattaggtttgt
ttgtttgttttcttgtttgtttttctgccttcacaggtgtttcagtttggactaagtata
gacagcttccccaaattagatcagataggatagcttgctgcccgtgtagggcatacatac
ttctcttcataaaaaggtgtttgttaaattcatagctctgtttagttgcaaggaaaaccc
tgacaagagaaattacaaggaaaatttaaaacttctatcagtaaaatatgagaaacattg
atagagaaccagacttccatttttcctctgggatgaaaataatagttgttcatttatata
ttcacaaatttcccccaagatttatttccgtgtccttgatgctcaagaaggcagcatcct
ttttatttaccagacaatgcaggcatacagagtgtgtgaacacaagtgtgtgaacacaag
tgtgagcgattcctttttccttttaacttggttacagctgtatgcctttagtgatttaag
tgggccagcactatagtttgtaatagattgtgttttaaggagccccacgaagacaaggac
cagaaatggccaaaatatttttagtctcacgacttcttggaaaagcataacaacaacaac
aacaacaacaacaacaacaacaacaacaacaacaatcccccttctccaaacatttatcca
gagaaagcctagccccttaccttcagaggctacatgatcaccacaaaatgcaatttttct
tgatttagcaaatcttatacttcattgccagtataataatgtgaggcgtaggagtcctct
ccacctgtcccgacatcgtgttattatgtgctttgttgcggttatacaaggcagtctaac
agtgctcaactttgcagtctgtatagagccaaggggttattttaaagagaattgttgtga
tcatctttccttcttatgtcttcattctgcatttgtgactagaaactaagggcattttct
ccctttctagaaacctcaggggcactttgtcatgttttgggggaagaggttaactctcgg
agagactgtagtgttttattatcagtaaatgtttttactctccagtgaaaggttggtaaa
taggcactgtttgtgaacacaaagagataataatggcccagactttcccccttcaaatgc
ttttttaacctaggaaaatgcattggtgatctcagccccagtgaacaatagctggaatca
caaaaccactactcttcaatctgcctgcccggcataattagaggctttgactcagggtaa
gaccaagggatgtttagaataggggcaagagctattctcccttaacttcccattgtgaag
ccaaggctccatatgttgaaaaaggctgggacttctgctgaacaaggagctgccttcggt
acctgttgtgcccgtgagaatgtttccccatgacccgtttggaggagactccattaacag
tctaagggcaccagacttgtgagaaggaagcattgtctggccgtgcagtaaggtcacata
gtgctgaaccatcacggtggctcccatttgatcagcctgggacacgtgaatgaatggctg
tcattgaagactctaggcagggtgaatagtgtatattacaaagcgactggagggacaggc
tctggccagcatggttgactggttaacacccaaaactcagaagggaagggcttgattctt
tttttcttctcagagaacactaccgtgaaagcagagtctatgctgtgcataattgtgagt
gaccaaagcctggtagaatataccttcactccttcatcccattattgtaattaaagatgg
ctgcggggcaccaaatggtgcagggatggcctgaaatgctcttctgaaggccttttgtta
agatagccaacctttcccttttggctcacagcgaaagcgtcatccgggttctcattgact
tggtcctttgtgtgaaccctgtctctgattaccctctacagactcctcctcgtgggtttg
gaaaggatggtgtgccataagctgttttcctttcttcaagtttttctccctaatgtactt
tcctgtgaatgatcagtaatttcctgttacctgtttaagctttggtttgtgaagctggca
gcctttatttctctgagtttttcccaacctccccccacccccaccacacacacacacaca
cacacacacacacacacacacacacacaccacacacacaccacacatcccacatcccccc
cccccccaccacttaaatcctaactctgtagctgatattcaattaggcagaatattcaca
gtgtctcagcaataaggattttcaaggattagtttgaattccctttgttaccatctgtac
atcttctgactgctctataaaataataattaacaataataaacaagacaaaaactgtacg
tctgtctgagcccagctgtcctgggacatttggtaattttagttcttgcaacagtgatgc
tagCCGGCAACTCATGAGGAGAA
Primer
(+)tgcatgtgtggcaaagtgtg
(+)ttctcctcatgagttgccgg


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