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Human element [ hs1572 ]


Position: chr3:71,186,391-71,188,583 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXP1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTTCCAATCTCTGGCTTTCAaactgacactttgctctcttctccatatccctttatatt
tcagcacatccttgccagcccagccaaggcacagcaaaacatcctcgccagcccagccaa
ggcacagcaaaacatcctccatacggtctgagatttttcacttcacttgctcacttctct
gctgcgggaagcttaatcttaaccagtgagatgggtccaccatttgtactattaatattt
tggggaacattagatgcatgaggtttcctggaggctggagaaatgcctgttctgattgtg
gaaatcagggctctttgttgataactgatgcagcctaaagcttttgtggctccagtttgg
gagttttagctttcaaagctcatgcagctcctccgatgtccaatgccagcagtgaaaatc
agcctaaggtatctggtcttctatcatgtttgtcaacaattcgcccaccttcaataacat
ccgaatgcatctggatggtgcccactaacctaccaaaaaatccaaaagataattctattt
atttatttatttattattattttttttttttggtgcaagaccatgggctttcaataaagg
taaagttctagatttctatacaagttgtgccttctccccttccctcctcctgtgaataca
gaaatctctttgactttaaaactgatgagcacccaccagccaggccctcaaggacagtgc
aggatgtgagaacggccttacaaggaccctccaagatatatttatcttttcacagttctt
ggaactgtggagagcctctcagatttaggctggatctctccttgtaatgtattattgcct
gagtgtttgagcagacaccacaaggaaccacaactaatgagctctagtcctttttctaat
taaggaacaaaggttcctgtgtgcgcagaatggtgacgctgtctggagaacacacgtgga
ggaagaagcgaatgcttctaattgcctcaaaatgggatttttaatatttaggaacgtaat
gggatcgggaaataagaacacttccaacatcctttataaataagcctttacaaaatattg
ttagctgttaataatacatcattatcaaaaatggaaagtcatgaatacagtgcatgtaac
ctttgtattcacgtgaattaacctatatgtacgaatacaatgatacatgaattagttttt
aaaaatacattaaaaaaaataaaaggccctcctctgaaaaagaaaggcgagaaggcagct
cctctgagcctgatattcctcagaccttagcagattaggattcaaacatgtaattaagaa
agataaccccagtttttatagtaattaggggctgtgggaaataggatactatctctcaaa
agtgatacaaatataccacacttctaaataacctgcaatgcttggaaagtatactcacta
ccaagggcaaagctgctatgcagtgagggaacagtaaatgacagactggcgttcaagtcc
attagctgctatgtgataggagcacattcactggcacgcgacctgtgaaaaatcttagat
ctctttaaatctttgaattggattactgcattaattcttaagaactgcaatccttcaacc
aagtcaaattaccctcattaacagtggaaaaactgcctctgcaataagttaaaaaaaaaa
aagatatttattacctataatcacttacacatacttcacctagaaatatgatgaacggat
gccaacaactctgaaaacggcatcctggtttcgcatgttaatttgggttaaaataaaaat
acaaatgcaagtatctgcatgctatttaaaatttgtttcacatctacaggaaattttctt
ttatgattacaatcctgagataagtaaatagctccattttacaggaggggaaattggggc
atacatagagatacggagccagttgtctaagctttcccgggctaattggggtaacgcaga
atctcctggtcctctgttctgggctcacactgtctgaattaaatcagaaattcagactca
taatggcactgtaatacaatgcactgacttctctaaatcaaactcagtgaattaaaaggg
aggcaaaataaatgagaagataggaatgcagctttaggtatagaaatgataaccacagta
aatactacaacagAAGCTGCCTCAATTCTTCCA
Primer
(+)ttttccaatctctggctttca
(+)tggaagaattgaggcagctt


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