Mouse element [ mm1560 ]Position: chr4:153,967,503-153,970,504 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Prdm16(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence AACAGGCCACCCACCCTATActataggtgttttgctgtgaggcagtgttcctaaaaactg ctatcttattacaatgcagtcctatgaatgagcacctggacacagacgcatgctgaaacc tgggcagcactgacccccaaaacttccctgtgtgttaccagtgggattaaaaaccacggt acacaagcttggcatggaggaaacaaagcataagaatggtatctggtgggtgagccttgg ttgctgtccaccccttgtgggctcagtacctgccttggtctaaggatctggtctcctgac ctaacctcttccccatctgtccctccctcctcgacacactgattgaacactagtatgcta gtcacccttggtcaccttcaggcctgacccttgggttggaaggtcatgatgctttcacac attccttcctgaccctcctctcctccaccctcttccttctggataccgcagaacggggaa gccaggctgcctgtgctcacagaacacaggccaagtgactctaattatggaccctgacaa tatcatatgggtttgttaataaaagcgcgacccctccccatcattccctagcagctggcc agcggcagggggtccacaaaagcctccctcccgaaggccccaaatgtggttgtatagaag ggagcggcaagtacagccagtggtctccacagggacagcctacacaagcactcccttctc cacacatagcctcagtttgaactgtaggttgccaacgctgctggtagcaaaaacagatac ccaagtgaaatccaccaggccaggcctccaacagaaggtcttcgatgtgtgtctccagac catgtctcatctcctgcatttctaagtgaacggcacacagccttcagagcctgtgtacac acaggctggggccagggggcttaagcaacactgtactctgaagaaactttaaagcatcaa atcacactcagggcagggagacaaacaccagggcaggaggctggtccctgagacacacgg gggctggtgcccgattttaaacatttcttacaagcgggaacttggagacaaagacggact tgctttcttctatgtctctccgccctttgtcaccaggagagaaacccagccttcccaagg ttccatccaacttctctttctctaagactttctgatgctgccatcaaatccacccaaaaa aaaccacagggaaggccagtcggaaagcgtggatgtgggcaggagtctgatgccagtctt ttccaccacttcctacctagataagatcttaatcgcagcccccaaattatctgggctgac atttatcaacgcccgtcctccaggccgcccgcgctgggccatcggcctttcttcccggtc tccctctcaatggaagttaattccgagtacatgatttatcttgctggggagcagctccga ggcggcccaccttttcaaagggcgggccgggagtgaattatagccgcgctgtccagtgat tgggttccgcggggacgcagaataggcagcagtgtgtcgcctgatgggatgctgggcctt ttcagcccgtgaagaaaaaagattaggcctctgacggcggggctgacaggcgagcttggg gcagcagacaaaaggccgtacctgaaagctggccgagcccctgccctgagggggtgtgca cactgccctaacaggctgtggctgcatgtgccccgtgcccccaccttgcttaggctcccc cacctcctgccccttcctctcttctctcttccgctcattcctctccttcttgtcctctcc tctctgctctgccctcctcccctcttccccttcctcctcctcttcttgctctcccagtct cttaacctccccatctttccctcctccctcctcccatgctctcctcccttctccctccct tccttcccacagcaggcccttgcacaccagggtccctcacagtgccctgcctggctctca gcccttccacaagaatcctgcctctgtgttgattcctcccctcctcagcctcgccctcag aaagagggagaatcctgcccatcatgccatgctgcccctccctccccagcacagagaaca cacagaagtctgtgaggacctgcccccacccaagggtggcaaagggcaaagttgttccct cctttctgctgttcccaggggacttggcaggcaggctgagagtgtgggcacaaggaccag cctgggccactggggcccagagctgagggtgaaaacagagggagcgctaggctccccaag actgtctggagccctgtgaactgagccaaggaggaaccccctccacgttcatcagctcga gtgtgctctccgtgctccccattgtgctccccatgctctccgtgttccaccgggcatccc cactgagtttccccagcccttccttgcattccagccagacaccactcatgttcaccatct tacacagatttggtcactctctctcgggcctcccactcctggcatgcagagccttgctaa agacatgaacacagaaactgttcctgtcaacacagctcatgttctgtctctaggtgtgtg ctcccgactcccccacagaggatctaaccatgtgtgtgctccccacgacacccccacagt tcatcttaacaatcctctggctcccatggctaccttatccaggaccatagggaccccaca gatcagagatgttaaccaggaagtgactgtcacatcaagctactctggattctcccagaa agaagccattgcctttgtactgatctgcatgaacattcaagaaatgttaagtattaaaac aaaacaaaataaaatgttcctttcaggatcaggagtcaaggagagatgggtgaggcctga cagacagctagagacactatgggatgggtggccttttgaggcctcctgattcttgcccca ataccaacatggacgaaaacagggtacaggtatggattggaaTCAAGGTATGTGGGGGAC CTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.