Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1557 ]


Position: chr6:65,259,696-65,261,683 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Hpgds - C130060K24Rik

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 8 embryos) 
midbrain (mesencephalon) (3 out of 8 embryos) 
neural tube (4 out of 8 embryos) 

Embryo 1

Embryo 2

Embryo 5


Fasta sequence
TTTCCTGCCCATCTCCATGAaatttcctacattttgaagatactccattgatatttttta
agagccacgtttaaattcttttacatacatactcacctaactaatgtcacaactcagtgt
tttctgctggacaccagaagccacagtctagttccccttctcatttgctagcctacaatt
gaatctaatgaatgctctgttcctatggtcattattgtcattatctttgagtgagtgttc
atttacgcttaataatgtgttcaccatgtctcagatcgccactgcttcttgaatgtcact
cttctagcttctatttctatgttatttattaaaaagttctttcttttggtgaaattgatt
tagtgacaaatgctttcaatatttgctggaatgtttctttgttgatcatttatccaggca
tagaattctgggttggttctaaaatgattacgttcatctctttaaataacaagtgagctg
acagtctgtcatttgctctccttgttctgttttgttgtttgttttgctttgttttttttt
tttttcccaacaaggtgatgttagttatcctgtatggttttgcacgttgttgcttttgag
acaggctctcttgctgattctgaagcttttcttttgggcttggcaggtgggctggctggt
cagggcctagaatctgcttgcccctgcccctcagtgctggaactacaggcatggttgtac
tcagctcttttgtgtaggttttggggatttccaaccatgcttacatatcaagtgctttta
cccactgaaccatcttaccagtgaactttaagccctaatagcaagtgtactcttttccat
tctttttaaaaccagattattgttaacatgtatcatattcattttttgtcatccttaaat
gtaaatcctactggtagccgagactatagcaatgcccaggataaactactttccaaaaca
tagaaatgactcatcccagaagaaaagactagacagaattaaatttcagataattaatgt
taatgcagccaataaaatgataacaatggagaattcttaaagtgtaataagcttatattt
gattagagtgatatgtttacctgtcatttttgatttctgctatgtttttgtgtcaaggtt
gtatagcaggaatatgcttatttcaagattgtcattgcgctatgttctttattctcctcc
tttatctccagtcccaggctcagcataagacgagaactgcctgctagatgcagccataag
aatgaaatgccccttttcacataacgcagctggccaattcctgagaattgatttcgctct
gcagcatgagatgaagggcttcagtgcatgcagttattatttccctaaaatcaatctatt
ttagactccaccgtgggaacaagagaggaacaaaggccgcacagcttggatggctgtttt
cttaggggaaccagggctcggttgaaggttgtgaatagtagcagggcgagcctattaata
atggtaaacgaaggcaatgctgtgatcgtctgaaccctgggaagagataagctaagaaaa
aaagagcattgtttttttttttctttagaaaaaaagaaataattaagaattgaatgagaa
gctggtcagagaagcaaggttgttgatgctttgtggcactctgaacaaacagaactcagt
ttttattgtaactctgtgagataaattttaatgtttagatgcctcacaagtccaccacag
agcggggtggaggtgggggtgggagggtggtctcatcattgcttcagcaaccctatgtct
ctttttttaccacaaactttcctcttttctttctttctttctttctttctttctttcttt
ctttctttctttctttctttctttctttctttctttcttttattttgttctttcattcct
tcttctttctttccaaccctctatttgaattgcccatctcaccttcttAATGGCCTATCC
CATCGCAC
Primer
(+)tttcctgcccatctccatga
(+)gtgcgatgggataggccatt


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.