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Mouse element [ mm1551 ]


Position: chr6:144,114,203-144,116,223 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sox5(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACAGTCAGTGACGCCAGTTTtgaactcttaacatctgattaaacaatcctctaaccctgg
gcttactaacctttaactatcttaaagagcacacagatgcctggatgaagacacagtccc
tttaagttgtcagaagaaaaaaaaaaagaccaaatgtagaagctgtaaaaaatggaaaaa
aaattagtgccagtccataactggtcgtttgttgtgaattactcaactgatgtattgtaa
cccatcagtcattaatcacagaaacagcagtttaaccctcagccatctacaggttaaaaa
tgtcacagtccttttgttgtgattatttataaattacttagaataatgtggcgttcggag
ctgggatctggaagtttgatatttatagacacagagagcaaactttttaaggaaataaga
tgctttttttccccatttaagtctggtcttgcctttttgacagctgtaagtccacaggat
gtggagggatgatttaaattttacatcagaattgtgactgcgctggacttttcccccttt
ctcaagggaggcattgttcttgcctttccataaccaggcgtgacagcgccagactggagt
catacggtgggcctctgagtcagcgtggaggagctctgctcccgagtctccccagatgcc
cagctccttgtgtgtctgagagctgtgcagacaacacagccacgcatccgcatccccatg
atcagggcagagagagcagaagtaaaagtctatagagagcagcaactctctcctccaatg
caggctgcagaaggcttttattaaaaatccttttcaaaggagccagacccaaaccaaaca
aaaatcccaagccttggtttaatttgagcagcattttttttttctaaccctaagattcag
aagccggacacacacgtcattgtgtgttctgggctagagaaacttagaggaatttcaaag
tcagaagtctcttggctttttgttttttcttcagacacatatagttgtcacatctgtaaa
ttcctggctgttagcagttgggtagggagggacagggaagggcatgagctgggcacctat
tctcaaacacccagctgagacatccatgaaagctgcctgtagaatcctataaacgaggct
ctctctccctgccatccacacagttgctagtgagcaggggacttgttctctgtctattgt
tgtatccctgaatgaactcggcagggaagcagggatatattctggatcaggtaaacctgc
tccctcgtgtgtgtaccagagcgagggcctccatcatggactgggcgtctcattttagtc
taacaaaagtcaggtgctggttgttttcgcttactacgtcgttctgaaatgtttgcttga
gagtttgttctaaagaaaaatagtaagtagaagcaaacttctcctgattcgcgctacgct
aacctataaaactgaaaagccaagggtatataggtagcgggtaaactatcatgacctcag
gaaccagcactaacctcttcaaagtgcatgccatttccacagtgttttcagcaggatgtg
accatgcctacctacggtcagatgccatgtgctagtcatgtctgcctatggccccatgcc
gtgtgctggtcatgtctatctatggttccatgtcatgtgctggtcatgtctgtctatggc
cccatgctgtgtgctggtcatgtctatctatggttccatgtcatgtgctggtcatgtctg
tctatggccccatgccgtgtgctggtcatgtctatctatggttccatgtcatgtgctggt
catgtctgtctatggcccaatcctatgtgggggtcatatctgtctatggccccatgccac
actctggtcatgtgtgcctatggccccatgccatgtgctggggacctttttaattgcttc
tttatcatatttgtcctgaatgaagacagatttctactgatgaacaccactagtcacata
aagatatacacaaaacaattaGTCTGGGGTAGGAGAGAGCA
Primer
(+)acagtcagtgacgccagttt
(+)tgctctctcctaccccagac


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