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Mouse element [ mm1545 ]


Position: chr18:54,919,394-54,921,412 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 9330117O12 - Zfp608

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTAAGCCATGTGTTACTGTAAGaataatatacatttacactgactactgtaaacataaa
ataattaacaataaagggaagatattatcccttaatagaatcctttttgccaagaccagt
ttaattttctccctcgtaatactgaatgataacccggagcccctgctttgtggagaaatc
accgaagcccctttacagccttcttgaattggcttctgctctcctgtcctcgcctctccc
tcttctgtgtgcacactcactgtctgatttatattaccctgtagcgtgtctttcttcttc
ttcttcttagctttcttccatctttttccctttcttctaggttttttttcctccttttca
ttaaaaactggctagaccccaaataggaagggaacagaccctctctctcctccccattct
ctctgcttccattcatcttattcttttattttatttttcttttcctctctgtgctatgga
gtcttcttaggcaacgcttattgctagagccactcaagaataaagaaaagccccaagcag
ctgccataaaatgcagtatatttaaattctatcttcctttcttcccttattctattagca
aggacataaagctcagaaatagaccagccctggcaagcctctcaagctatttaagaacct
ttagctttcacctaatactgaaatatgcttgcctcctgtgttgagcaggtaactggacca
aatttcacagcatccccttaggggatacggcatttgtattcatatttttctatatgcata
atcagtattaaatacaatctaatgaagtgtctttgtgtctaaaacaccgttacctgagga
ctctccttacaaaaatgttcattgaatttttttttctccattcatgtctggcagcaacaa
ctgcagcacggtttttacatggttggtgtaggtgttgttaatgtacttcccacctccatt
taaatgcaaatcttcatgcaaataatcgcttggaggaaaaagagagagggagagagcctg
tgttcagcagaagacaaagctagagggataatgggaagcatgaatagggtgtcagtggag
gactgcagaagaaaaccctgctctgttcggaaatgaaaacacattaacgacggcacagag
gattgctcaataggttcttacagcattgttgtatgtaaacatgattcccagcagatgaaa
caaaatgaatgagttggggggaaaaatttaaatgcctcccggagaaggaggagagaaagg
tcaagtcagttgttcagaaatggcccttgatcagggtgtgaaggaccaaccgactatggg
caaatatgtctgtctcttcgagaaataccggtcattgtccaaacagcaagcctttcaaaa
gaaaagtaggaaatgaactaagacagaaaaaatggcattataccagagaacagcaacttg
gtagcttagtttagctccaaggagggctggatttcaatgccagggaaatttccaagtttt
gttatttgcaaagaaaaaaaaagcgtggggggggggggcattacagcaaaggttaagcac
cagccttaggaaatgcagacagtcccagagcttcccaattttttttaagtgcctctccaa
gtttctttaggatgtgagcaagggagttgatccgaaagtaagacagttgcaaagtagcac
gaccaagccacagtgtgtgaaggaggaaaatgacctgtgatgccacagatcagaatggtt
atggctatccttagcacacactgctgctttacagaaagcccctgagcattcctggaggct
ctgtgattggccggccgcctttggatttcacgattccacggtgccagtgcagcaacaaca
aaggaggcttcatctggacacatccaggaagagtttcagtagactgaggaaaaagtatca
taccctcgcaaaatggagtgacttcagtgttcttggatcatgcacttggatagacctttg
acttccttggctcaaaaatCACTGAACAACCAACCCTCC
Primer
(+)GCTAAGCCATGTGTTACTGTAAG
(+)GGAGGGTTGGTTGTTCAGTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.