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Mouse element [ mm1543 ]


Position: chr15:77,165,783-77,167,710 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rbfox2 - Apol7a

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTGATGGAGGAAGGTGGGTgaggtggttttttgacgaggctctcagtagcccaggctgg
cttcaaacctacaattaagtaaagctgatcacaaattattcctacttatttatttatttt
tggcctcaaatttctgatcctttggcctcagcctcgagagctctggaattacaggtgtac
actaccatccctggtttattttggtgctggggacagaaccctgggttgagcacgtgatag
gcaagctttctagtaactgagccatgacccaaaccctgaaggtttggtttccttcaatat
ttttatatttttatgtgtatgaatatttgtcttcctgtatatcagcacatcacatatacg
tgtgcacgttgcctgtggaggctggaagaagatgttgaattccctggaactggagttaaa
catggttgtgaggcctcacatgggtgctgggagctgaactcaggtcctctgcaagagcaa
gcccatcttgtaacgaggagagactgagggtcatggaactggcattattcaaggtcacga
aggcactcgtagaaacaggattggagacctggtttcattcctgcttgcttccaggactcc
ggttccattcctgatcctggcctgcttcttttctagctaggaagagacctctggaggatt
tgtgtgtgcgaggttcccattgcttttaagagtccaggatgagagcggcctcatctgcgc
ccacgcagggctgagtccaagggtaccagctttggttcaggcgcctggctggggagtctt
aaccaaagctcctttgcttcagcctcttccttcctttagcctgctgtgccaaaggtcagc
cactgaagcatctaacaacgacctgcatgctcccaccgcctacagactctgaaagacccc
ctgtctgtcctgcatcactgtgtggtctgctgagttaaaggaacgctcctgggttacagc
agggaaaaggcaacagacacattcaaatagatcaaaaacgtaagcctgggtcatccaggg
acctaagagaaaccagcttggctccaagaaatccaggctggcccgtaaagcagacaggcc
acgtgatgggtgtcccccaatctggcagtgctaatggagttacaggcgcagtgttacccg
ggattgcaaatgcttgcggtccccacccatttcgtggcaggaagtccagtgttttccaag
ggttttccaagaacgcccagaagcccgctggggcgagccgcgcctccggcccgcgaccgc
agcagaagctccatcgcgccccctggaggcggctctctgctggttcctgcctgctgatgc
aagagtagtggcctgcctccacctctgttttgagaccgtggtgatacatcacaagtatcc
cttaactgatggagaaaagaaaccttctgcctgctctgcaaagccgtacagcaaagcgac
tagggttcccaaagaggaacgccttcatgccttcttgcttcttcttttcctctagggggc
gcgcgcaagcccaggaccgctttcctagtgaggagctcggggtagcaaagtcgtacaacg
agcttttgttgtctagtttcaagcccctttcacgttcttgtccctttgattcccatcata
gccgtcccacagacagcactgtaactatctccatttctcagtccgcaaaactgaggcata
gcgagttcaccaagatggaacagcattgcaaggccagcagagcagatccaaacggttggc
agctcgtctaggccccacccaaacccagaacttctgtggtaccccaggctcctcccaaca
cggtgttggcctacgccactccaggggtctgtgttaggcatgaagtcggctaggctgcag
tctccacacgcccaggctttaggcattgtctctgttactctgggggtaCCAGCAGGCATT
GTTCTTGG
Primer
(+)actgatggaggaaggtgggt
(+)ccaagaacaatgcctgctgg


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